Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NOTCH4Q99466 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.95■□□□□ 0.46
NOTCH4Q99466 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.95■□□□□ 0.46
NOTCH4Q99466 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.95■□□□□ 0.46
NOTCH4Q99466 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.95■□□□□ 0.46
NOTCH4Q99466 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.95■□□□□ 0.46
NOTCH4Q99466 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.95■□□□□ 0.46
NOTCH4Q99466 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NOTCH4Q99466 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NOTCH4Q99466 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NOTCH4Q99466 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NOTCH4Q99466 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NOTCH4Q99466 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NOTCH4Q99466 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NOTCH4Q99466 AC046185.3-201ENST00000623228 1824 ntBASIC17.95■□□□□ 0.46
NOTCH4Q99466 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NOTCH4Q99466 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.95■□□□□ 0.46
NOTCH4Q99466 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NOTCH4Q99466 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NOTCH4Q99466 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NOTCH4Q99466 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 AC009113.1-201ENST00000570267 2443 ntBASIC17.94■□□□□ 0.46
NOTCH4Q99466 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NOTCH4Q99466 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NOTCH4Q99466 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 AC004408.2-201ENST00000623613 2777 ntBASIC17.94■□□□□ 0.46
NOTCH4Q99466 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NOTCH4Q99466 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NOTCH4Q99466 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 AC093520.2-201ENST00000561830 333 ntBASIC17.94■□□□□ 0.46
NOTCH4Q99466 AC106028.4-201ENST00000614509 607 ntBASIC17.94■□□□□ 0.46
NOTCH4Q99466 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NOTCH4Q99466 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NOTCH4Q99466 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NOTCH4Q99466 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NOTCH4Q99466 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.93■□□□□ 0.46
NOTCH4Q99466 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NOTCH4Q99466 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NOTCH4Q99466 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.93■□□□□ 0.46
NOTCH4Q99466 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.93■□□□□ 0.46
NOTCH4Q99466 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NOTCH4Q99466 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NOTCH4Q99466 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.93■□□□□ 0.46
NOTCH4Q99466 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.93■□□□□ 0.46
NOTCH4Q99466 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.93■□□□□ 0.46
NOTCH4Q99466 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.93■□□□□ 0.46
NOTCH4Q99466 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.93■□□□□ 0.46
NOTCH4Q99466 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NOTCH4Q99466 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
NOTCH4Q99466 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NOTCH4Q99466 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NOTCH4Q99466 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NOTCH4Q99466 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NOTCH4Q99466 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NOTCH4Q99466 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NOTCH4Q99466 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NOTCH4Q99466 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.93■□□□□ 0.46
NOTCH4Q99466 AL035633.1-201ENST00000406139 838 ntBASIC17.93■□□□□ 0.46
NOTCH4Q99466 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.93■□□□□ 0.46
NOTCH4Q99466 AL627223.1-201ENST00000416693 442 ntBASIC17.93■□□□□ 0.46
NOTCH4Q99466 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.93■□□□□ 0.46
NOTCH4Q99466 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NOTCH4Q99466 AL096865.1-201ENST00000606796 927 ntBASIC17.93■□□□□ 0.46
NOTCH4Q99466 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NOTCH4Q99466 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
NOTCH4Q99466 AC009093.7-201ENST00000623853 1223 ntBASIC17.93■□□□□ 0.46
NOTCH4Q99466 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.93■□□□□ 0.46
NOTCH4Q99466 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.92■□□□□ 0.46
NOTCH4Q99466 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NOTCH4Q99466 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.92■□□□□ 0.46
NOTCH4Q99466 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.92■□□□□ 0.46
NOTCH4Q99466 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NOTCH4Q99466 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NOTCH4Q99466 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NOTCH4Q99466 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NOTCH4Q99466 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.92■□□□□ 0.46
NOTCH4Q99466 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NOTCH4Q99466 AC140658.5-201ENST00000438532 169 ntBASIC17.92■□□□□ 0.46
NOTCH4Q99466 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NOTCH4Q99466 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms