Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TWNKQ96RR1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TWNKQ96RR1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TWNKQ96RR1 AC004870.1-201ENST00000315132 882 ntBASIC18.62■□□□□ 0.57
TWNKQ96RR1 AC003669.1-201ENST00000334569 611 ntBASIC18.62■□□□□ 0.57
TWNKQ96RR1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TWNKQ96RR1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.62■□□□□ 0.57
TWNKQ96RR1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TWNKQ96RR1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.62■□□□□ 0.57
TWNKQ96RR1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.62■□□□□ 0.57
TWNKQ96RR1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TWNKQ96RR1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TWNKQ96RR1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TWNKQ96RR1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TWNKQ96RR1 AC009336.1-201ENST00000608941 1553 ntBASIC18.62■□□□□ 0.57
TWNKQ96RR1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TWNKQ96RR1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TWNKQ96RR1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TWNKQ96RR1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TWNKQ96RR1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.62■□□□□ 0.57
TWNKQ96RR1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TWNKQ96RR1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TWNKQ96RR1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TWNKQ96RR1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TWNKQ96RR1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TWNKQ96RR1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.62■□□□□ 0.57
TWNKQ96RR1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TWNKQ96RR1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TWNKQ96RR1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TWNKQ96RR1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TWNKQ96RR1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.61■□□□□ 0.57
TWNKQ96RR1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.61■□□□□ 0.57
TWNKQ96RR1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TWNKQ96RR1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.61■□□□□ 0.57
TWNKQ96RR1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TWNKQ96RR1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TWNKQ96RR1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TWNKQ96RR1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TWNKQ96RR1 SIGLEC16-201ENST00000599858 1437 ntBASIC18.61■□□□□ 0.57
TWNKQ96RR1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TWNKQ96RR1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.61■□□□□ 0.57
TWNKQ96RR1 MYCLP1-201ENST00000372451 1075 ntBASIC18.61■□□□□ 0.57
TWNKQ96RR1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.61■□□□□ 0.57
TWNKQ96RR1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
TWNKQ96RR1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.61■□□□□ 0.57
TWNKQ96RR1 STK19B-204ENST00000512515 211 ntBASIC18.61■□□□□ 0.57
TWNKQ96RR1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.61■□□□□ 0.57
TWNKQ96RR1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.61■□□□□ 0.57
TWNKQ96RR1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TWNKQ96RR1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.61■□□□□ 0.57
TWNKQ96RR1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TWNKQ96RR1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TWNKQ96RR1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TWNKQ96RR1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TWNKQ96RR1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.61■□□□□ 0.57
TWNKQ96RR1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TWNKQ96RR1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TWNKQ96RR1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.61■□□□□ 0.57
TWNKQ96RR1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
TWNKQ96RR1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
TWNKQ96RR1 AL356309.3-201ENST00000624132 1934 ntBASIC18.61■□□□□ 0.57
TWNKQ96RR1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TWNKQ96RR1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TWNKQ96RR1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TWNKQ96RR1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TWNKQ96RR1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.6■□□□□ 0.57
TWNKQ96RR1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TWNKQ96RR1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TWNKQ96RR1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TWNKQ96RR1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
TWNKQ96RR1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.6■□□□□ 0.57
TWNKQ96RR1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.6■□□□□ 0.57
TWNKQ96RR1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.6■□□□□ 0.57
TWNKQ96RR1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TWNKQ96RR1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TWNKQ96RR1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TWNKQ96RR1 AC046185.3-201ENST00000623228 1824 ntBASIC18.6■□□□□ 0.57
TWNKQ96RR1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TWNKQ96RR1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
TWNKQ96RR1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TWNKQ96RR1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.6■□□□□ 0.57
TWNKQ96RR1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TWNKQ96RR1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TWNKQ96RR1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TWNKQ96RR1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TWNKQ96RR1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TWNKQ96RR1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
TWNKQ96RR1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TWNKQ96RR1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TWNKQ96RR1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.59■□□□□ 0.57
TWNKQ96RR1 AL138688.1-201ENST00000624851 1594 ntBASIC18.59■□□□□ 0.57
TWNKQ96RR1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TWNKQ96RR1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.59■□□□□ 0.57
TWNKQ96RR1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TWNKQ96RR1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TWNKQ96RR1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TWNKQ96RR1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TWNKQ96RR1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TWNKQ96RR1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TWNKQ96RR1 AL020989.1-201ENST00000422979 469 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms