Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 AC112482.1-201ENST00000492080 688 ntBASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 NCF1C-201ENST00000438382 1427 ntBASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC85AQ96PX6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
CCDC85AQ96PX6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC85AQ96PX6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
CCDC85AQ96PX6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.77■■□□□ 1.07
CCDC85AQ96PX6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.77■■□□□ 1.07
CCDC85AQ96PX6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 AC138028.4-201ENST00000564984 1845 ntBASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 RPSAP43-201ENST00000402237 625 ntBASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 RPS8P6-201ENST00000426177 609 ntBASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 GPX1P2-201ENST00000429271 606 ntBASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 AC108073.2-201ENST00000464002 357 ntBASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 AC040169.1-201ENST00000565382 521 ntBASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 AC018845.2-201ENST00000568326 409 ntBASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 MIR4751-201ENST00000578027 74 ntBASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC85AQ96PX6 FLJ13224-201ENST00000313737 1514 ntBASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 AC009336.1-201ENST00000608941 1553 ntBASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 UPF3AP3-201ENST00000420996 769 ntBASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 RPS15P9-201ENST00000494093 319 ntBASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 AC004790.2-201ENST00000623588 572 ntBASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 PGM5P2-202ENST00000637225 1043 ntBASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 KRT18P55-202ENST00000578578 1546 ntBASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC85AQ96PX6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85AQ96PX6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms