Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 PMPCAP1-201ENST00000508114 1576 ntBASIC14.61□□□□□ -0.07
GAFA1Q96PS6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 AP001269.4-201ENST00000609611 512 ntBASIC14.61□□□□□ -0.07
GAFA1Q96PS6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 AP000867.4-201ENST00000641616 219 ntBASIC14.61□□□□□ -0.07
GAFA1Q96PS6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 AC132938.5-201ENST00000624980 1813 ntBASIC14.61□□□□□ -0.07
GAFA1Q96PS6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GAFA1Q96PS6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 AC003669.1-201ENST00000334569 611 ntBASIC14.6□□□□□ -0.07
GAFA1Q96PS6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 KLF4P1-201ENST00000412782 1185 ntBASIC14.6□□□□□ -0.07
GAFA1Q96PS6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.6□□□□□ -0.07
GAFA1Q96PS6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 IFNL4P1-201ENST00000607083 540 ntBASIC14.6□□□□□ -0.07
GAFA1Q96PS6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
GAFA1Q96PS6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms