Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 AL096828.2-201ENST00000567259 1965 ntBASIC13.34□□□□□ -0.27
AP1S3Q96PC3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 NIFKP9-201ENST00000419265 221 ntBASIC13.34□□□□□ -0.27
AP1S3Q96PC3 AC004980.1-204ENST00000429707 299 ntBASIC13.34□□□□□ -0.27
AP1S3Q96PC3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 AP003097.1-201ENST00000530657 1135 ntBASIC13.34□□□□□ -0.27
AP1S3Q96PC3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
AP1S3Q96PC3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
AP1S3Q96PC3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
AP1S3Q96PC3 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
AP1S3Q96PC3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.33□□□□□ -0.27
AP1S3Q96PC3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
AP1S3Q96PC3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
AP1S3Q96PC3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
AP1S3Q96PC3 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 AP002982.1-201ENST00000492365 877 ntBASIC13.33□□□□□ -0.28
AP1S3Q96PC3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 AL109923.1-201ENST00000618799 583 ntBASIC13.33□□□□□ -0.28
AP1S3Q96PC3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.33□□□□□ -0.28
AP1S3Q96PC3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
AP1S3Q96PC3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AP1S3Q96PC3 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AP1S3Q96PC3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AP1S3Q96PC3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
AP1S3Q96PC3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
AP1S3Q96PC3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.32□□□□□ -0.28
AP1S3Q96PC3 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
AP1S3Q96PC3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms