Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.15■□□□□ 0.02
CMTM3Q96MX0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CMTM3Q96MX0 AC093525.9-201ENST00000624961 1746 ntBASIC15.14■□□□□ 0.01
CMTM3Q96MX0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 ID1-201ENST00000376105 1233 ntBASIC15.14■□□□□ 0.01
CMTM3Q96MX0 AL355802.2-201ENST00000402069 882 ntBASIC15.14■□□□□ 0.01
CMTM3Q96MX0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 AC104771.1-201ENST00000603335 964 ntBASIC15.14■□□□□ 0.01
CMTM3Q96MX0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 CROCCP1-201ENST00000426910 5675 ntBASIC15.14■□□□□ 0.01
CMTM3Q96MX0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMTM3Q96MX0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 KRT8P47-201ENST00000604727 1398 ntBASIC15.13■□□□□ 0.01
CMTM3Q96MX0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 AC116562.2-201ENST00000507042 360 ntBASIC15.13■□□□□ 0.01
CMTM3Q96MX0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms