Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 KRT17P6-201ENST00000453795 1220 ntBASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 TP73-AS1-210ENST00000637775 1455 ntBASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 AC009053.2-201ENST00000563701 2365 ntBASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 AC012313.1-201ENST00000593393 3059 ntBASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 AL121761.2-201ENST00000598007 1648 ntBASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 MIR3180-1-201ENST00000580374 94 ntBASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 MIR3180-3-201ENST00000584616 94 ntBASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 AP002414.4-201ENST00000589764 1148 ntBASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM5Q96HC4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
PDLIM5Q96HC4 AC046185.3-201ENST00000623228 1824 ntBASIC17.14■□□□□ 0.34
PDLIM5Q96HC4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 INTS4P1-201ENST00000438455 1935 ntBASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 SLC25A1P3-201ENST00000395415 828 ntBASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 TOB2P1-201ENST00000469761 992 ntBASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms