Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.16■□□□□ 0.5
IFT43Q96FT9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IFT43Q96FT9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.15■□□□□ 0.5
IFT43Q96FT9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.15■□□□□ 0.5
IFT43Q96FT9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IFT43Q96FT9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.15■□□□□ 0.5
IFT43Q96FT9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
IFT43Q96FT9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IFT43Q96FT9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
IFT43Q96FT9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
IFT43Q96FT9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IFT43Q96FT9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IFT43Q96FT9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IFT43Q96FT9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.15■□□□□ 0.5
IFT43Q96FT9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.15■□□□□ 0.5
IFT43Q96FT9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IFT43Q96FT9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.15■□□□□ 0.5
IFT43Q96FT9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.15■□□□□ 0.5
IFT43Q96FT9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
IFT43Q96FT9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.15■□□□□ 0.5
IFT43Q96FT9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
IFT43Q96FT9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
IFT43Q96FT9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.15■□□□□ 0.5
IFT43Q96FT9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.15■□□□□ 0.5
IFT43Q96FT9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.15■□□□□ 0.5
IFT43Q96FT9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
IFT43Q96FT9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
IFT43Q96FT9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
IFT43Q96FT9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
IFT43Q96FT9 AL391005.1-201ENST00000623953 2435 ntBASIC18.14■□□□□ 0.5
IFT43Q96FT9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
IFT43Q96FT9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.14■□□□□ 0.5
IFT43Q96FT9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
IFT43Q96FT9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
IFT43Q96FT9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IFT43Q96FT9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
IFT43Q96FT9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
IFT43Q96FT9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IFT43Q96FT9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IFT43Q96FT9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IFT43Q96FT9 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IFT43Q96FT9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.14■□□□□ 0.49
IFT43Q96FT9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.14■□□□□ 0.49
IFT43Q96FT9 TSPY19P-201ENST00000418461 509 ntBASIC18.14■□□□□ 0.49
IFT43Q96FT9 TSPY18P-201ENST00000441642 509 ntBASIC18.14■□□□□ 0.49
IFT43Q96FT9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
IFT43Q96FT9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.14■□□□□ 0.49
IFT43Q96FT9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.14■□□□□ 0.49
IFT43Q96FT9 GUSBP12-201ENST00000513727 720 ntBASIC18.14■□□□□ 0.49
IFT43Q96FT9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.14■□□□□ 0.49
IFT43Q96FT9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.14■□□□□ 0.49
IFT43Q96FT9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
IFT43Q96FT9 AL121772.3-201ENST00000610840 674 ntBASIC18.14■□□□□ 0.49
IFT43Q96FT9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IFT43Q96FT9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.14■□□□□ 0.49
IFT43Q96FT9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IFT43Q96FT9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.14■□□□□ 0.49
IFT43Q96FT9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
IFT43Q96FT9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IFT43Q96FT9 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IFT43Q96FT9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
IFT43Q96FT9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IFT43Q96FT9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
IFT43Q96FT9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
IFT43Q96FT9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
IFT43Q96FT9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
IFT43Q96FT9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.13■□□□□ 0.49
IFT43Q96FT9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
IFT43Q96FT9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.13■□□□□ 0.49
IFT43Q96FT9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.13■□□□□ 0.49
IFT43Q96FT9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.13■□□□□ 0.49
IFT43Q96FT9 LINC00265-3P-201ENST00000447588 903 ntBASIC18.13■□□□□ 0.49
IFT43Q96FT9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.13■□□□□ 0.49
IFT43Q96FT9 IGHV3-41-201ENST00000613121 348 ntBASIC18.13■□□□□ 0.49
IFT43Q96FT9 AC116407.2-201ENST00000613639 860 ntBASIC18.13■□□□□ 0.49
IFT43Q96FT9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.13■□□□□ 0.49
IFT43Q96FT9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
IFT43Q96FT9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.13■□□□□ 0.49
IFT43Q96FT9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms