Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AC138028.4-201ENST00000564984 1845 ntBASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 AC112698.1-201ENST00000510299 916 ntBASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 AL121912.1-201ENST00000603683 238 ntBASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 REXO1L6P-202ENST00000619970 1078 ntBASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 KRT8P10-201ENST00000450021 1447 ntBASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 AP000997.3-201ENST00000623333 2250 ntBASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 TP73-AS1-210ENST00000637775 1455 ntBASIC17.44■□□□□ 0.38
SH3KBP1Q96B97 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 FLJ13224-201ENST00000313737 1514 ntBASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 AC005336.2-201ENST00000593183 939 ntBASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 AL138831.2-201ENST00000606564 490 ntBASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.43■□□□□ 0.38
SH3KBP1Q96B97 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 AC125634.1-201ENST00000438758 1403 ntBASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 AL031008.1-201ENST00000619963 541 ntBASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SH3KBP1Q96B97 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms