Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HPS1Q92902 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS1Q92902 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS1Q92902 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HPS1Q92902 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HPS1Q92902 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS1Q92902 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HPS1Q92902 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS1Q92902 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS1Q92902 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS1Q92902 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HPS1Q92902 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.15■□□□□ 0.18
HPS1Q92902 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.14■□□□□ 0.18
HPS1Q92902 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
HPS1Q92902 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HPS1Q92902 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
HPS1Q92902 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
HPS1Q92902 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HPS1Q92902 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HPS1Q92902 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.14■□□□□ 0.17
HPS1Q92902 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.14■□□□□ 0.17
HPS1Q92902 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS1Q92902 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.14■□□□□ 0.17
HPS1Q92902 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS1Q92902 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS1Q92902 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.14■□□□□ 0.17
HPS1Q92902 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HPS1Q92902 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HPS1Q92902 AC132872.4-202ENST00000622924 2756 ntBASIC16.14■□□□□ 0.17
HPS1Q92902 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
HPS1Q92902 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HPS1Q92902 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HPS1Q92902 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
HPS1Q92902 BX664615.1-201ENST00000443558 458 ntBASIC16.14■□□□□ 0.17
HPS1Q92902 ECEL1P2-202ENST00000465689 757 ntBASIC16.14■□□□□ 0.17
HPS1Q92902 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.14■□□□□ 0.17
HPS1Q92902 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
HPS1Q92902 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HPS1Q92902 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HPS1Q92902 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
HPS1Q92902 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS1Q92902 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS1Q92902 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS1Q92902 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS1Q92902 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS1Q92902 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.14■□□□□ 0.17
HPS1Q92902 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HPS1Q92902 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
HPS1Q92902 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS1Q92902 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.14■□□□□ 0.17
HPS1Q92902 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HPS1Q92902 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.14■□□□□ 0.17
HPS1Q92902 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.14■□□□□ 0.17
HPS1Q92902 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS1Q92902 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HPS1Q92902 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS1Q92902 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HPS1Q92902 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HPS1Q92902 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.13■□□□□ 0.17
HPS1Q92902 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.13■□□□□ 0.17
HPS1Q92902 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.13■□□□□ 0.17
HPS1Q92902 MFAP1P1-201ENST00000442257 1255 ntBASIC16.13■□□□□ 0.17
HPS1Q92902 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.13■□□□□ 0.17
HPS1Q92902 AC104076.2-201ENST00000448912 469 ntBASIC16.13■□□□□ 0.17
HPS1Q92902 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.13■□□□□ 0.17
HPS1Q92902 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.13■□□□□ 0.17
HPS1Q92902 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.13■□□□□ 0.17
HPS1Q92902 AC010203.1-204ENST00000548782 407 ntBASIC16.13■□□□□ 0.17
HPS1Q92902 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 AC010653.2-201ENST00000623505 997 ntBASIC16.13■□□□□ 0.17
HPS1Q92902 AC083906.6-201ENST00000641366 219 ntBASIC16.13■□□□□ 0.17
HPS1Q92902 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HPS1Q92902 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.13■□□□□ 0.17
HPS1Q92902 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
HPS1Q92902 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.13■□□□□ 0.17
HPS1Q92902 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms