Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.54■■□□□ 1.04
RPGRQ92834 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRQ92834 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRQ92834 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RPGRQ92834 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRQ92834 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRQ92834 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RPGRQ92834 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRQ92834 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRQ92834 AL020996.1-203ENST00000536896 2307 ntBASIC21.54■■□□□ 1.04
RPGRQ92834 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.54■■□□□ 1.04
RPGRQ92834 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRQ92834 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC21.54■■□□□ 1.04
RPGRQ92834 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRQ92834 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.54■■□□□ 1.04
RPGRQ92834 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RPGRQ92834 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRQ92834 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRQ92834 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.54■■□□□ 1.04
RPGRQ92834 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRQ92834 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRQ92834 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RPGRQ92834 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.53■■□□□ 1.04
RPGRQ92834 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRQ92834 REXO1L9P-201ENST00000604264 2108 ntBASIC21.53■■□□□ 1.04
RPGRQ92834 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.53■■□□□ 1.04
RPGRQ92834 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRQ92834 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRQ92834 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRQ92834 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
RPGRQ92834 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRQ92834 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRQ92834 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RPGRQ92834 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.53■■□□□ 1.04
RPGRQ92834 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.53■■□□□ 1.04
RPGRQ92834 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC21.53■■□□□ 1.04
RPGRQ92834 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.53■■□□□ 1.04
RPGRQ92834 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRQ92834 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRQ92834 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRQ92834 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRQ92834 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRQ92834 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.53■■□□□ 1.04
RPGRQ92834 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRQ92834 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRQ92834 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RPGRQ92834 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPGRQ92834 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.52■■□□□ 1.04
RPGRQ92834 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPGRQ92834 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RPGRQ92834 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.52■■□□□ 1.04
RPGRQ92834 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RPGRQ92834 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.52■■□□□ 1.04
RPGRQ92834 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RPGRQ92834 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RPGRQ92834 AC004461.1-201ENST00000412461 403 ntBASIC21.52■■□□□ 1.04
RPGRQ92834 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.52■■□□□ 1.04
RPGRQ92834 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.52■■□□□ 1.04
RPGRQ92834 AC105339.1-204ENST00000636249 355 ntBASIC21.52■■□□□ 1.04
RPGRQ92834 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RPGRQ92834 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
RPGRQ92834 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPGRQ92834 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPGRQ92834 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RPGRQ92834 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
RPGRQ92834 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.52■■□□□ 1.03
RPGRQ92834 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRQ92834 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RPGRQ92834 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RPGRQ92834 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRQ92834 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RPGRQ92834 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.51■■□□□ 1.03
RPGRQ92834 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.51■■□□□ 1.03
RPGRQ92834 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.51■■□□□ 1.03
RPGRQ92834 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.51■■□□□ 1.03
RPGRQ92834 REXO1L3P-201ENST00000622202 1288 ntBASIC21.51■■□□□ 1.03
RPGRQ92834 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
RPGRQ92834 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRQ92834 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRQ92834 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRQ92834 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRQ92834 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRQ92834 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRQ92834 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC21.51■■□□□ 1.03
RPGRQ92834 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRQ92834 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRQ92834 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRQ92834 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RPGRQ92834 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRQ92834 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRQ92834 AP000997.3-201ENST00000623333 2250 ntBASIC21.5■■□□□ 1.03
RPGRQ92834 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRQ92834 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRQ92834 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.5■■□□□ 1.03
RPGRQ92834 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRQ92834 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.5■■□□□ 1.03
RPGRQ92834 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
RPGRQ92834 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC21.5■■□□□ 1.03
RPGRQ92834 FAM185BP-201ENST00000443595 716 ntBASIC21.5■■□□□ 1.03
RPGRQ92834 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms