Protein–RNA interactions for Protein: Q92629

SGCD, Delta-sarcoglycan, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCDQ92629 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SGCDQ92629 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SGCDQ92629 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SGCDQ92629 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SGCDQ92629 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SGCDQ92629 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SGCDQ92629 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SGCDQ92629 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.12■□□□□ 0.17
SGCDQ92629 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.12■□□□□ 0.17
SGCDQ92629 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGCDQ92629 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SGCDQ92629 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
SGCDQ92629 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGCDQ92629 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SGCDQ92629 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SGCDQ92629 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.11■□□□□ 0.17
SGCDQ92629 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGCDQ92629 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGCDQ92629 AC092068.3-201ENST00000587894 2016 ntBASIC16.11■□□□□ 0.17
SGCDQ92629 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.11■□□□□ 0.17
SGCDQ92629 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SGCDQ92629 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.11■□□□□ 0.17
SGCDQ92629 PRORSD1P-201ENST00000295112 541 ntBASIC16.11■□□□□ 0.17
SGCDQ92629 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGCDQ92629 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SGCDQ92629 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SGCDQ92629 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.11■□□□□ 0.17
SGCDQ92629 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.11■□□□□ 0.17
SGCDQ92629 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.11■□□□□ 0.17
SGCDQ92629 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SGCDQ92629 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SGCDQ92629 AL023875.1-201ENST00000640777 796 ntBASIC16.11■□□□□ 0.17
SGCDQ92629 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SGCDQ92629 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGCDQ92629 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGCDQ92629 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGCDQ92629 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGCDQ92629 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SGCDQ92629 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGCDQ92629 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.11■□□□□ 0.17
SGCDQ92629 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.11■□□□□ 0.17
SGCDQ92629 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.1■□□□□ 0.17
SGCDQ92629 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.1■□□□□ 0.17
SGCDQ92629 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.1■□□□□ 0.17
SGCDQ92629 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SGCDQ92629 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SGCDQ92629 KRASP1-201ENST00000407852 552 ntBASIC16.1■□□□□ 0.17
SGCDQ92629 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.1■□□□□ 0.17
SGCDQ92629 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
SGCDQ92629 FAM207BP-201ENST00000447172 505 ntBASIC16.1■□□□□ 0.17
SGCDQ92629 AC011506.1-201ENST00000474329 610 ntBASIC16.1■□□□□ 0.17
SGCDQ92629 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.1■□□□□ 0.17
SGCDQ92629 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.1■□□□□ 0.17
SGCDQ92629 MIR4674-201ENST00000582457 87 ntBASIC16.1■□□□□ 0.17
SGCDQ92629 AC130371.2-201ENST00000619443 611 ntBASIC16.1■□□□□ 0.17
SGCDQ92629 LINC01451-201ENST00000623792 534 ntBASIC16.1■□□□□ 0.17
SGCDQ92629 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.1■□□□□ 0.17
SGCDQ92629 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SGCDQ92629 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.1■□□□□ 0.17
SGCDQ92629 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.1■□□□□ 0.17
SGCDQ92629 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SGCDQ92629 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.1■□□□□ 0.17
SGCDQ92629 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.1■□□□□ 0.17
SGCDQ92629 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGCDQ92629 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SGCDQ92629 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SGCDQ92629 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SGCDQ92629 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.09■□□□□ 0.17
SGCDQ92629 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SGCDQ92629 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SGCDQ92629 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.09■□□□□ 0.17
SGCDQ92629 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
SGCDQ92629 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SGCDQ92629 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SGCDQ92629 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SGCDQ92629 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SGCDQ92629 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SGCDQ92629 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms