Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ATL1Q8WXF7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATL1Q8WXF7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
ATL1Q8WXF7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATL1Q8WXF7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATL1Q8WXF7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATL1Q8WXF7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.19■□□□□ 0.34
ATL1Q8WXF7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATL1Q8WXF7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATL1Q8WXF7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.19■□□□□ 0.34
ATL1Q8WXF7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATL1Q8WXF7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 AC007967.3-201ENST00000434308 558 ntBASIC17.18■□□□□ 0.34
ATL1Q8WXF7 DRAXINP1-201ENST00000437611 948 ntBASIC17.18■□□□□ 0.34
ATL1Q8WXF7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 AC009533.2-201ENST00000543664 586 ntBASIC17.18■□□□□ 0.34
ATL1Q8WXF7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 Z69720.1-201ENST00000601483 472 ntBASIC17.18■□□□□ 0.34
ATL1Q8WXF7 AL445228.2-201ENST00000605589 952 ntBASIC17.18■□□□□ 0.34
ATL1Q8WXF7 AC010331.1-201ENST00000611423 582 ntBASIC17.18■□□□□ 0.34
ATL1Q8WXF7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.18■□□□□ 0.34
ATL1Q8WXF7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 AC009053.2-201ENST00000563701 2365 ntBASIC17.18■□□□□ 0.34
ATL1Q8WXF7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 AC010460.3-201ENST00000511359 1579 ntBASIC17.18■□□□□ 0.34
ATL1Q8WXF7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
ATL1Q8WXF7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 AC141586.5-201ENST00000624546 2050 ntBASIC17.17■□□□□ 0.34
ATL1Q8WXF7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 FAM220CP-201ENST00000395253 831 ntBASIC17.17■□□□□ 0.34
ATL1Q8WXF7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 AC122714.2-201ENST00000502787 707 ntBASIC17.17■□□□□ 0.34
ATL1Q8WXF7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 AC005336.2-201ENST00000593183 939 ntBASIC17.17■□□□□ 0.34
ATL1Q8WXF7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 AC069148.1-201ENST00000608741 768 ntBASIC17.17■□□□□ 0.34
ATL1Q8WXF7 AL358472.4-201ENST00000633140 710 ntBASIC17.17■□□□□ 0.34
ATL1Q8WXF7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms