Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC11.46□□□□□ -0.57
SMIM11BQ8TCY0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC11.46□□□□□ -0.57
SMIM11BQ8TCY0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 REXO1L11P-201ENST00000620964 1927 ntBASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 AC126755.1-201ENST00000525846 6405 ntBASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 GPAT2P1-201ENST00000444924 1672 ntBASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 AC116353.5-201ENST00000638148 1699 ntBASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC11.46□□□□□ -0.58
SMIM11BQ8TCY0 NORAD-201ENST00000565493 5339 ntBASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 CYP51A1P1-201ENST00000492267 1507 ntBASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 AL023284.2-201ENST00000405850 579 ntBASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 RHBDF1P1-201ENST00000427504 1941 ntBASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC11.45□□□□□ -0.58
SMIM11BQ8TCY0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 AC105917.1-201ENST00000506637 2539 ntBASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms