Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ACTG1P4-201ENST00000425123 1122 ntBASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 KRT8P23-201ENST00000560090 1207 ntBASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 AC104794.3-201ENST00000566840 1248 ntBASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
ALMS1Q8TCU4 AL096828.2-201ENST00000567259 1965 ntBASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 AC087163.2-201ENST00000457299 853 ntBASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 AC002558.1-201ENST00000488906 803 ntBASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 DGCR5-201ENST00000399539 862 ntBASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 AC009407.1-201ENST00000568958 598 ntBASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 WASH6P-202ENST00000359512 1437 ntBASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC11.69□□□□□ -0.54
ALMS1Q8TCU4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 MIR346-201ENST00000362234 95 ntBASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 HMGA1P7-201ENST00000406908 502 ntBASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms