Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 AC006011.2-201ENST00000621313 1158 ntBASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLHC1Q8NHS4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 TSPY5P-201ENST00000426936 936 ntBASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 AC112907.2-201ENST00000448639 330 ntBASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 AC084018.2-201ENST00000613093 2607 ntBASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLHC1Q8NHS4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLHC1Q8NHS4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLHC1Q8NHS4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLHC1Q8NHS4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLHC1Q8NHS4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 HBZP1-201ENST00000354915 429 ntBASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CLHC1Q8NHS4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 MIR662-201ENST00000384847 95 ntBASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 RNF152P1-201ENST00000397754 604 ntBASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 AC211429.1-201ENST00000415277 523 ntBASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 AK4P3-201ENST00000418260 669 ntBASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 GPR32P1-201ENST00000601788 811 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms