Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 LYSMD4-203ENST00000378904 2122 ntBASIC16.47■□□□□ 0.23
NUP43Q8NFH3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 AC246785.2-201ENST00000432512 513 ntBASIC16.47■□□□□ 0.23
NUP43Q8NFH3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 VENTXP7-201ENST00000475503 772 ntBASIC16.47■□□□□ 0.23
NUP43Q8NFH3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 AL138831.2-201ENST00000606564 490 ntBASIC16.47■□□□□ 0.23
NUP43Q8NFH3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 AC106820.2-201ENST00000563775 3264 ntBASIC16.47■□□□□ 0.23
NUP43Q8NFH3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 KRT18P1-202ENST00000452408 1331 ntBASIC16.46■□□□□ 0.23
NUP43Q8NFH3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 TSSC2-201ENST00000450217 709 ntBASIC16.46■□□□□ 0.23
NUP43Q8NFH3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 AC002558.1-201ENST00000488906 803 ntBASIC16.46■□□□□ 0.23
NUP43Q8NFH3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.46■□□□□ 0.23
NUP43Q8NFH3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUP43Q8NFH3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NUP43Q8NFH3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 AC020916.1-201ENST00000587762 1774 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms