Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SLC44A3Q8N4M1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SLC44A3Q8N4M1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A3Q8N4M1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A3Q8N4M1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SLC44A3Q8N4M1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A3Q8N4M1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A3Q8N4M1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC44A3Q8N4M1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
SLC44A3Q8N4M1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SLC44A3Q8N4M1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.89■□□□□ 0.46
SLC44A3Q8N4M1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
SLC44A3Q8N4M1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 FAM185BP-201ENST00000443595 716 ntBASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 AC116407.2-201ENST00000613639 860 ntBASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 AC098818.2-201ENST00000564925 2320 ntBASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A3Q8N4M1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 AC006116.8-202ENST00000587620 1550 ntBASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 FAM86GP-201ENST00000448322 971 ntBASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 AL031598.1-201ENST00000561511 1773 ntBASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
SLC44A3Q8N4M1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
SLC44A3Q8N4M1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC44A3Q8N4M1 AC092919.2-201ENST00000623631 1645 ntBASIC17.87■□□□□ 0.45
SLC44A3Q8N4M1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC44A3Q8N4M1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC44A3Q8N4M1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC44A3Q8N4M1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SLC44A3Q8N4M1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC44A3Q8N4M1 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.87■□□□□ 0.45
SLC44A3Q8N4M1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC44A3Q8N4M1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC44A3Q8N4M1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC44A3Q8N4M1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC44A3Q8N4M1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC44A3Q8N4M1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC44A3Q8N4M1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SLC44A3Q8N4M1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SLC44A3Q8N4M1 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.87■□□□□ 0.45
SLC44A3Q8N4M1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms