Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.34■□□□□ 0.21
BEST3Q8N1M1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.34■□□□□ 0.21
BEST3Q8N1M1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.34■□□□□ 0.21
BEST3Q8N1M1 AC021087.4-201ENST00000563761 564 ntBASIC16.34■□□□□ 0.21
BEST3Q8N1M1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.34■□□□□ 0.21
BEST3Q8N1M1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BEST3Q8N1M1 MIR7706-201ENST00000613747 67 ntBASIC16.34■□□□□ 0.21
BEST3Q8N1M1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BEST3Q8N1M1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BEST3Q8N1M1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BEST3Q8N1M1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST3Q8N1M1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST3Q8N1M1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.34■□□□□ 0.21
BEST3Q8N1M1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST3Q8N1M1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.34■□□□□ 0.21
BEST3Q8N1M1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST3Q8N1M1 NOC2LP1-202ENST00000452600 2235 ntBASIC16.34■□□□□ 0.21
BEST3Q8N1M1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST3Q8N1M1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.34■□□□□ 0.21
BEST3Q8N1M1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
BEST3Q8N1M1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
BEST3Q8N1M1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.33■□□□□ 0.21
BEST3Q8N1M1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BEST3Q8N1M1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BEST3Q8N1M1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
BEST3Q8N1M1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BEST3Q8N1M1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.33■□□□□ 0.21
BEST3Q8N1M1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BEST3Q8N1M1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BEST3Q8N1M1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
BEST3Q8N1M1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
BEST3Q8N1M1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 AL139288.1-201ENST00000623748 933 ntBASIC16.33■□□□□ 0.2
BEST3Q8N1M1 FAM215A-202ENST00000632077 792 ntBASIC16.33■□□□□ 0.2
BEST3Q8N1M1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 AC243591.1-201ENST00000452967 1364 ntBASIC16.33■□□□□ 0.2
BEST3Q8N1M1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.33■□□□□ 0.2
BEST3Q8N1M1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.32■□□□□ 0.2
BEST3Q8N1M1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 AC122714.2-201ENST00000502787 707 ntBASIC16.32■□□□□ 0.2
BEST3Q8N1M1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 AP000867.4-201ENST00000641616 219 ntBASIC16.32■□□□□ 0.2
BEST3Q8N1M1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms