Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 AC009078.2-202ENST00000463353 338 ntBASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 AL139327.4-201ENST00000612362 153 ntBASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.21■□□□□ 0.19
C9orf40Q8IXQ3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
C9orf40Q8IXQ3 LYSMD4-203ENST00000378904 2122 ntBASIC16.21■□□□□ 0.18
C9orf40Q8IXQ3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.21■□□□□ 0.18
C9orf40Q8IXQ3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
C9orf40Q8IXQ3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 FAM197Y8-203ENST00000450145 560 ntBASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.2■□□□□ 0.18
C9orf40Q8IXQ3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 AC021087.4-201ENST00000563761 564 ntBASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf40Q8IXQ3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms