Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 MIR149-201ENST00000384879 89 ntBASIC18.63■□□□□ 0.57
RNF135Q8IUD6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 AC108751.1-201ENST00000490852 363 ntBASIC18.63■□□□□ 0.57
RNF135Q8IUD6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 C20orf181-201ENST00000623918 480 ntBASIC18.63■□□□□ 0.57
RNF135Q8IUD6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF135Q8IUD6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 AC009154.2-201ENST00000621177 724 ntBASIC18.62■□□□□ 0.57
RNF135Q8IUD6 PGM5P2-202ENST00000637225 1043 ntBASIC18.62■□□□□ 0.57
RNF135Q8IUD6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF135Q8IUD6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 AL096865.1-201ENST00000606796 927 ntBASIC18.61■□□□□ 0.57
RNF135Q8IUD6 AC092865.6-201ENST00000642101 219 ntBASIC18.61■□□□□ 0.57
RNF135Q8IUD6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 AL390961.4-201ENST00000623958 2535 ntBASIC18.61■□□□□ 0.57
RNF135Q8IUD6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms