Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRTM4Q86VH4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.26■□□□□ 0.35
LRRTM4Q86VH4 AC026471.1-201ENST00000564629 3026 ntBASIC17.26■□□□□ 0.35
LRRTM4Q86VH4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 SIGLEC16-201ENST00000599858 1437 ntBASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 KRT18P67-201ENST00000432816 1264 ntBASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 STK19B-204ENST00000512515 211 ntBASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 AL662844.1-201ENST00000546340 181 ntBASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 AC073592.4-201ENST00000623827 446 ntBASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRTM4Q86VH4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
LRRTM4Q86VH4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 LINC00304-203ENST00000565008 1864 ntBASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 MRPL3P1-201ENST00000400109 1033 ntBASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 FDX1P1-201ENST00000449115 551 ntBASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 BX005266.1-201ENST00000473402 457 ntBASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 RNPS1P1-201ENST00000507437 918 ntBASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 AC021087.4-201ENST00000563761 564 ntBASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 SLC25A6P4-201ENST00000586535 553 ntBASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 AL773604.1-201ENST00000617417 272 ntBASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 AL022326.1-202ENST00000641533 845 ntBASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms