Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 MIR943-201ENST00000401286 94 ntBASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 AL353135.1-201ENST00000606729 504 ntBASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 MED16-214ENST00000617672 554 ntTSL 5 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 AC023141.13-201ENST00000604991 943 ntBASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 AC069335.1-201ENST00000489972 472 ntBASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 AL020996.1-203ENST00000536896 2307 ntBASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 FAM185BP-201ENST00000443595 716 ntBASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13BQ7Z7G8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 NAA50-208ENST00000497255 789 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 AL606495.2-201ENST00000605867 535 ntBASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 AP001059.3-201ENST00000619053 235 ntBASIC10.73□□□□□ -0.69
VPS13BQ7Z7G8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms