Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 AL390955.2-201ENST00000603032 514 ntBASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 REXO1L9P-201ENST00000604264 2108 ntBASIC20.27■□□□□ 0.84
OTOP1Q7RTM1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
OTOP1Q7RTM1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
OTOP1Q7RTM1 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.27■□□□□ 0.83
OTOP1Q7RTM1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
OTOP1Q7RTM1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
OTOP1Q7RTM1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
OTOP1Q7RTM1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.26■□□□□ 0.83
OTOP1Q7RTM1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.26■□□□□ 0.83
OTOP1Q7RTM1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
OTOP1Q7RTM1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.26■□□□□ 0.83
OTOP1Q7RTM1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
OTOP1Q7RTM1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.26■□□□□ 0.83
OTOP1Q7RTM1 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.26■□□□□ 0.83
OTOP1Q7RTM1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.26■□□□□ 0.83
OTOP1Q7RTM1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.26■□□□□ 0.83
OTOP1Q7RTM1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.26■□□□□ 0.83
OTOP1Q7RTM1 AC105339.1-204ENST00000636249 355 ntBASIC20.26■□□□□ 0.83
OTOP1Q7RTM1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.26■□□□□ 0.83
OTOP1Q7RTM1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
OTOP1Q7RTM1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
OTOP1Q7RTM1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
OTOP1Q7RTM1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.26■□□□□ 0.83
OTOP1Q7RTM1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 FAM86GP-201ENST00000448322 971 ntBASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 RNA5SP421-201ENST00000516864 134 ntBASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 AC093520.2-201ENST00000561830 333 ntBASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 AC096734.2-201ENST00000562054 433 ntBASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 AC091812.2-201ENST00000619081 385 ntBASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.25■□□□□ 0.83
OTOP1Q7RTM1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 PMS2P4-201ENST00000412466 1052 ntBASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 AC074386.1-202ENST00000463561 864 ntBASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 AC005225.4-201ENST00000557330 545 ntBASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 AC010654.1-201ENST00000615722 808 ntBASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 AC135050.7-201ENST00000624508 2218 ntBASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
OTOP1Q7RTM1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 AIRN-201ENST00000601203 4374 ntBASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms