Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 AC092368.3-202ENST00000574180 1591 ntBASIC13.32□□□□□ -0.28
MRPL54Q6P161 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.32□□□□□ -0.28
MRPL54Q6P161 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL54Q6P161 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.31□□□□□ -0.28
MRPL54Q6P161 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL54Q6P161 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL54Q6P161 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL54Q6P161 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 AC023824.1-201ENST00000562945 2975 ntBASIC13.3□□□□□ -0.28
MRPL54Q6P161 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL54Q6P161 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL54Q6P161 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL54Q6P161 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL54Q6P161 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 MIR564-202ENST00000385049 94 ntBASIC13.3□□□□□ -0.28
MRPL54Q6P161 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL54Q6P161 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL54Q6P161 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL54Q6P161 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL54Q6P161 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL54Q6P161 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL54Q6P161 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL54Q6P161 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL54Q6P161 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL54Q6P161 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.3□□□□□ -0.28
MRPL54Q6P161 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL54Q6P161 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.29□□□□□ -0.28
MRPL54Q6P161 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL54Q6P161 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms