Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 AC092053.1-201ENST00000605787 1936 ntBASIC16.6■□□□□ 0.25
LPCAT4Q643R3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 AC004951.3-201ENST00000418645 1148 ntBASIC16.6■□□□□ 0.25
LPCAT4Q643R3 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.6■□□□□ 0.25
LPCAT4Q643R3 AC083906.2-201ENST00000511578 360 ntBASIC16.6■□□□□ 0.25
LPCAT4Q643R3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 MIR4758-201ENST00000577688 71 ntBASIC16.6■□□□□ 0.25
LPCAT4Q643R3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.6■□□□□ 0.25
LPCAT4Q643R3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
LPCAT4Q643R3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 POM121L13P-201ENST00000422362 380 ntBASIC16.59■□□□□ 0.25
LPCAT4Q643R3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LPCAT4Q643R3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LPCAT4Q643R3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LPCAT4Q643R3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LPCAT4Q643R3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LPCAT4Q643R3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LPCAT4Q643R3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 SLC29A4P1-201ENST00000398760 971 ntBASIC16.58■□□□□ 0.24
LPCAT4Q643R3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 AC008040.2-201ENST00000461049 708 ntBASIC16.58■□□□□ 0.24
LPCAT4Q643R3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 UNC93B4-201ENST00000505679 747 ntBASIC16.58■□□□□ 0.24
LPCAT4Q643R3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms