Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HERC4Q5GLZ8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.66■□□□□ 0.74
HERC4Q5GLZ8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERC4Q5GLZ8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HERC4Q5GLZ8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HERC4Q5GLZ8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 LINC00304-203ENST00000565008 1864 ntBASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 MIR1233-2-201ENST00000408138 82 ntBASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 MIR1233-1-201ENST00000408722 82 ntBASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 AC091607.1-201ENST00000490318 1060 ntBASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 AC005336.2-201ENST00000593183 939 ntBASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 AC125634.1-201ENST00000438758 1403 ntBASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 AC010460.3-201ENST00000511359 1579 ntBASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 AC133963.1-201ENST00000504166 1679 ntBASIC19.65■□□□□ 0.74
HERC4Q5GLZ8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
HERC4Q5GLZ8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HERC4Q5GLZ8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 KRT16P4-201ENST00000453883 522 ntBASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
HERC4Q5GLZ8 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 VENTXP7-201ENST00000475503 772 ntBASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 AL138831.2-201ENST00000606564 490 ntBASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 LINC01451-201ENST00000623792 534 ntBASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.63■□□□□ 0.73
HERC4Q5GLZ8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms