Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 RNF126P1-202ENST00000569893 925 ntBASIC17.13■□□□□ 0.33
SGO1Q5FBB7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 HYMAI.1-201ENST00000620949 238 ntBASIC17.13■□□□□ 0.33
SGO1Q5FBB7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SGO1Q5FBB7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 Z83836.1-201ENST00000624605 1642 ntBASIC17.12■□□□□ 0.33
SGO1Q5FBB7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 RN7SL850P-201ENST00000579959 291 ntBASIC17.12■□□□□ 0.33
SGO1Q5FBB7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 PCDHA12-202ENST00000613593 2588 ntBASIC17.12■□□□□ 0.33
SGO1Q5FBB7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.12■□□□□ 0.33
SGO1Q5FBB7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 AL138688.1-201ENST00000624851 1594 ntBASIC17.11■□□□□ 0.33
SGO1Q5FBB7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 DDX43P3-201ENST00000441064 443 ntBASIC17.11■□□□□ 0.33
SGO1Q5FBB7 MTCL1P1-201ENST00000446207 792 ntBASIC17.11■□□□□ 0.33
SGO1Q5FBB7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SGO1Q5FBB7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms