Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 AKR1C7P-201ENST00000305623 895 ntBASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 AL139327.4-201ENST00000612362 153 ntBASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 CROCCP2-202ENST00000412962 2773 ntBASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CCSMST1Q4G0I0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 IGHV3-52-201ENST00000519770 353 ntBASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 STK25P1-201ENST00000585406 838 ntBASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 IFNL4P1-201ENST00000607083 540 ntBASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 AC073592.5-201ENST00000624854 528 ntBASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 AP000867.4-201ENST00000641616 219 ntBASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 PMPCAP1-201ENST00000508114 1576 ntBASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCSMST1Q4G0I0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.04■□□□□ 0.32
CCSMST1Q4G0I0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CCSMST1Q4G0I0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCSMST1Q4G0I0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms