Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCNA1P78396 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCNA1P78396 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.89■□□□□ 0.77
CCNA1P78396 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.89■□□□□ 0.77
CCNA1P78396 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCNA1P78396 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.89■□□□□ 0.77
CCNA1P78396 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.89■□□□□ 0.77
CCNA1P78396 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.89■□□□□ 0.77
CCNA1P78396 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.89■□□□□ 0.77
CCNA1P78396 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CCNA1P78396 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.89■□□□□ 0.77
CCNA1P78396 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCNA1P78396 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.89■□□□□ 0.77
CCNA1P78396 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCNA1P78396 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCNA1P78396 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCNA1P78396 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCNA1P78396 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCNA1P78396 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCNA1P78396 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCNA1P78396 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CCNA1P78396 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.88■□□□□ 0.77
CCNA1P78396 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCNA1P78396 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCNA1P78396 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCNA1P78396 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCNA1P78396 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCNA1P78396 AL590787.1-201ENST00000568856 1315 ntBASIC19.88■□□□□ 0.77
CCNA1P78396 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCNA1P78396 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCNA1P78396 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.88■□□□□ 0.77
CCNA1P78396 FAM8A3P-201ENST00000427218 844 ntBASIC19.88■□□□□ 0.77
CCNA1P78396 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.88■□□□□ 0.77
CCNA1P78396 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.88■□□□□ 0.77
CCNA1P78396 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCNA1P78396 AL513210.1-201ENST00000629608 234 ntBASIC19.88■□□□□ 0.77
CCNA1P78396 AC092902.6-201ENST00000641783 218 ntBASIC19.88■□□□□ 0.77
CCNA1P78396 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.88■□□□□ 0.77
CCNA1P78396 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.88■□□□□ 0.77
CCNA1P78396 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCNA1P78396 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCNA1P78396 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCNA1P78396 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCNA1P78396 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCNA1P78396 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.87■□□□□ 0.77
CCNA1P78396 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.87■□□□□ 0.77
CCNA1P78396 AC004449.1-201ENST00000564240 433 ntBASIC19.87■□□□□ 0.77
CCNA1P78396 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.87■□□□□ 0.77
CCNA1P78396 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.87■□□□□ 0.77
CCNA1P78396 REXO1L3P-201ENST00000622202 1288 ntBASIC19.87■□□□□ 0.77
CCNA1P78396 AC093028.1-201ENST00000622998 982 ntBASIC19.87■□□□□ 0.77
CCNA1P78396 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCNA1P78396 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCNA1P78396 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.87■□□□□ 0.77
CCNA1P78396 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCNA1P78396 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCNA1P78396 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCNA1P78396 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCNA1P78396 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
CCNA1P78396 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.86■□□□□ 0.77
CCNA1P78396 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCNA1P78396 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCNA1P78396 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCNA1P78396 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.86■□□□□ 0.77
CCNA1P78396 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCNA1P78396 WIZP1-201ENST00000531444 2299 ntBASIC19.86■□□□□ 0.77
CCNA1P78396 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.86■□□□□ 0.77
CCNA1P78396 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCNA1P78396 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCNA1P78396 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CCNA1P78396 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.86■□□□□ 0.77
CCNA1P78396 FAM185BP-201ENST00000443595 716 ntBASIC19.86■□□□□ 0.77
CCNA1P78396 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.86■□□□□ 0.77
CCNA1P78396 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.86■□□□□ 0.77
CCNA1P78396 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.86■□□□□ 0.77
CCNA1P78396 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CCNA1P78396 AL020996.1-203ENST00000536896 2307 ntBASIC19.86■□□□□ 0.77
CCNA1P78396 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCNA1P78396 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.86■□□□□ 0.77
CCNA1P78396 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
CCNA1P78396 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCNA1P78396 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCNA1P78396 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CCNA1P78396 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCNA1P78396 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.85■□□□□ 0.77
CCNA1P78396 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.85■□□□□ 0.77
CCNA1P78396 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCNA1P78396 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCNA1P78396 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCNA1P78396 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.85■□□□□ 0.77
CCNA1P78396 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.85■□□□□ 0.77
CCNA1P78396 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.85■□□□□ 0.77
CCNA1P78396 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.85■□□□□ 0.77
CCNA1P78396 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.85■□□□□ 0.77
CCNA1P78396 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCNA1P78396 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCNA1P78396 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.85■□□□□ 0.77
CCNA1P78396 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CCNA1P78396 AC105339.1-204ENST00000636249 355 ntBASIC19.85■□□□□ 0.77
CCNA1P78396 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms