Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RPL39P62891 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RPL39P62891 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RPL39P62891 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RPL39P62891 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC12.46□□□□□ -0.41
RPL39P62891 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
RPL39P62891 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC12.46□□□□□ -0.41
RPL39P62891 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC12.46□□□□□ -0.41
RPL39P62891 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RPL39P62891 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC12.46□□□□□ -0.41
RPL39P62891 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.46□□□□□ -0.41
RPL39P62891 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.46□□□□□ -0.41
RPL39P62891 AC104390.1-201ENST00000555663 520 ntBASIC12.46□□□□□ -0.41
RPL39P62891 RARRES2P10-201ENST00000564312 460 ntBASIC12.46□□□□□ -0.41
RPL39P62891 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC12.46□□□□□ -0.41
RPL39P62891 DGCR10-201ENST00000609839 495 ntBASIC12.46□□□□□ -0.41
RPL39P62891 CR769767.2-201ENST00000622735 460 ntBASIC12.46□□□□□ -0.41
RPL39P62891 AC112497.1-201ENST00000624824 639 ntBASIC12.46□□□□□ -0.41
RPL39P62891 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC12.46□□□□□ -0.41
RPL39P62891 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
RPL39P62891 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.46□□□□□ -0.41
RPL39P62891 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RPL39P62891 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.46□□□□□ -0.42
RPL39P62891 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RPL39P62891 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RPL39P62891 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.46□□□□□ -0.42
RPL39P62891 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.46□□□□□ -0.42
RPL39P62891 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.46□□□□□ -0.42
RPL39P62891 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RPL39P62891 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RPL39P62891 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
RPL39P62891 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RPL39P62891 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
RPL39P62891 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RPL39P62891 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RPL39P62891 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC12.46□□□□□ -0.42
RPL39P62891 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.45□□□□□ -0.42
RPL39P62891 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
RPL39P62891 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.45□□□□□ -0.42
RPL39P62891 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
RPL39P62891 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.45□□□□□ -0.42
RPL39P62891 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
RPL39P62891 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC12.45□□□□□ -0.42
RPL39P62891 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
RPL39P62891 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.45□□□□□ -0.42
RPL39P62891 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
RPL39P62891 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
RPL39P62891 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
RPL39P62891 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
RPL39P62891 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.45□□□□□ -0.42
RPL39P62891 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.45□□□□□ -0.42
RPL39P62891 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC12.45□□□□□ -0.42
RPL39P62891 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
RPL39P62891 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC12.45□□□□□ -0.42
RPL39P62891 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.45□□□□□ -0.42
RPL39P62891 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.45□□□□□ -0.42
RPL39P62891 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.45□□□□□ -0.42
RPL39P62891 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC12.45□□□□□ -0.42
RPL39P62891 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 AC006058.3-201ENST00000606217 1069 ntBASIC12.45□□□□□ -0.42
RPL39P62891 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
RPL39P62891 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
RPL39P62891 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.45□□□□□ -0.42
RPL39P62891 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC12.45□□□□□ -0.42
RPL39P62891 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
RPL39P62891 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
RPL39P62891 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC12.45□□□□□ -0.42
RPL39P62891 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.45□□□□□ -0.42
RPL39P62891 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
RPL39P62891 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RPL39P62891 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.45□□□□□ -0.42
RPL39P62891 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.45□□□□□ -0.42
RPL39P62891 AL603756.1-201ENST00000606511 2163 ntBASIC12.45□□□□□ -0.42
RPL39P62891 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPL39P62891 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RPL39P62891 PKD1P5-201ENST00000532415 10291 ntBASIC12.44□□□□□ -0.42
RPL39P62891 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.44□□□□□ -0.42
RPL39P62891 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms