Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5BP61020 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5BP61020 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5BP61020 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5BP61020 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5BP61020 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5BP61020 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB5BP61020 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
RAB5BP61020 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5BP61020 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5BP61020 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RAB5BP61020 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5BP61020 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5BP61020 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5BP61020 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5BP61020 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
RAB5BP61020 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB5BP61020 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB5BP61020 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB5BP61020 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5BP61020 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RAB5BP61020 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAB5BP61020 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.77□□□□□ -0.2
RAB5BP61020 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
RAB5BP61020 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
RAB5BP61020 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAB5BP61020 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB5BP61020 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB5BP61020 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RAB5BP61020 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB5BP61020 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB5BP61020 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB5BP61020 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB5BP61020 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.77□□□□□ -0.21
RAB5BP61020 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RAB5BP61020 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.77□□□□□ -0.21
RAB5BP61020 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB5BP61020 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB5BP61020 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RAB5BP61020 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB5BP61020 AC010141.2-201ENST00000452426 721 ntBASIC13.77□□□□□ -0.21
RAB5BP61020 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC13.77□□□□□ -0.21
RAB5BP61020 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RAB5BP61020 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB5BP61020 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.77□□□□□ -0.21
RAB5BP61020 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB5BP61020 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB5BP61020 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RAB5BP61020 AC116351.2-201ENST00000606540 1585 ntBASIC13.77□□□□□ -0.21
RAB5BP61020 AL137784.3-201ENST00000623858 2288 ntBASIC13.77□□□□□ -0.21
RAB5BP61020 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB5BP61020 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB5BP61020 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.77□□□□□ -0.21
RAB5BP61020 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RAB5BP61020 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RAB5BP61020 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB5BP61020 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.77□□□□□ -0.21
RAB5BP61020 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB5BP61020 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB5BP61020 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB5BP61020 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB5BP61020 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.76□□□□□ -0.21
RAB5BP61020 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB5BP61020 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB5BP61020 MTMR9LP-203ENST00000426597 1545 ntBASIC13.76□□□□□ -0.21
RAB5BP61020 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB5BP61020 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB5BP61020 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB5BP61020 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB5BP61020 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC13.76□□□□□ -0.21
RAB5BP61020 AL355001.2-201ENST00000620617 1191 ntBASIC13.76□□□□□ -0.21
RAB5BP61020 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RAB5BP61020 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB5BP61020 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB5BP61020 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RAB5BP61020 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB5BP61020 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB5BP61020 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB5BP61020 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB5BP61020 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.76□□□□□ -0.21
RAB5BP61020 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB5BP61020 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB5BP61020 AC092171.3-201ENST00000610122 2651 ntBASIC13.76□□□□□ -0.21
RAB5BP61020 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB5BP61020 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB5BP61020 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RAB5BP61020 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB5BP61020 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB5BP61020 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.75□□□□□ -0.21
RAB5BP61020 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB5BP61020 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB5BP61020 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB5BP61020 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB5BP61020 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.75□□□□□ -0.21
RAB5BP61020 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB5BP61020 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB5BP61020 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB5BP61020 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB5BP61020 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB5BP61020 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms