Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB38P57729 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB38P57729 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB38P57729 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB38P57729 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB38P57729 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB38P57729 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB38P57729 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB38P57729 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB38P57729 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB38P57729 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RAB38P57729 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB38P57729 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
RAB38P57729 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.52■□□□□ 0.24
RAB38P57729 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB38P57729 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB38P57729 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB38P57729 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB38P57729 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB38P57729 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB38P57729 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
RAB38P57729 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB38P57729 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.52■□□□□ 0.24
RAB38P57729 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB38P57729 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.52■□□□□ 0.24
RAB38P57729 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.52■□□□□ 0.24
RAB38P57729 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.52■□□□□ 0.24
RAB38P57729 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB38P57729 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB38P57729 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.52■□□□□ 0.24
RAB38P57729 AL691432.3-201ENST00000621860 400 ntBASIC16.52■□□□□ 0.24
RAB38P57729 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB38P57729 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB38P57729 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB38P57729 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB38P57729 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB38P57729 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB38P57729 AL138688.1-201ENST00000624851 1594 ntBASIC16.51■□□□□ 0.23
RAB38P57729 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB38P57729 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB38P57729 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB38P57729 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RAB38P57729 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB38P57729 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB38P57729 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB38P57729 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB38P57729 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB38P57729 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB38P57729 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
RAB38P57729 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
RAB38P57729 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAB38P57729 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB38P57729 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB38P57729 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB38P57729 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
RAB38P57729 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.51■□□□□ 0.23
RAB38P57729 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB38P57729 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB38P57729 MTDHP3-201ENST00000594186 672 ntBASIC16.51■□□□□ 0.23
RAB38P57729 AC008608.2-201ENST00000606089 416 ntBASIC16.51■□□□□ 0.23
RAB38P57729 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB38P57729 AL355877.3-201ENST00000622820 899 ntBASIC16.51■□□□□ 0.23
RAB38P57729 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB38P57729 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB38P57729 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RAB38P57729 LYSMD4-203ENST00000378904 2122 ntBASIC16.51■□□□□ 0.23
RAB38P57729 LINC00896-202ENST00000609602 2128 ntBASIC16.51■□□□□ 0.23
RAB38P57729 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB38P57729 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RAB38P57729 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB38P57729 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB38P57729 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB38P57729 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB38P57729 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB38P57729 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
RAB38P57729 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB38P57729 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RAB38P57729 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB38P57729 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
RAB38P57729 AC079776.2-201ENST00000641154 1609 ntBASIC16.5■□□□□ 0.23
RAB38P57729 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB38P57729 AC004870.1-201ENST00000315132 882 ntBASIC16.5■□□□□ 0.23
RAB38P57729 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB38P57729 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB38P57729 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB38P57729 AL020989.1-201ENST00000422979 469 ntBASIC16.5■□□□□ 0.23
RAB38P57729 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB38P57729 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.5■□□□□ 0.23
RAB38P57729 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB38P57729 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.5■□□□□ 0.23
RAB38P57729 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.5■□□□□ 0.23
RAB38P57729 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RAB38P57729 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RAB38P57729 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.5■□□□□ 0.23
RAB38P57729 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB38P57729 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB38P57729 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB38P57729 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB38P57729 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.5■□□□□ 0.23
RAB38P57729 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms