Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.11□□□□□ -0.31
CMC4P56277 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
CMC4P56277 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMC4P56277 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.11□□□□□ -0.31
CMC4P56277 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.1□□□□□ -0.31
CMC4P56277 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
CMC4P56277 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CMC4P56277 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
CMC4P56277 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CMC4P56277 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.1□□□□□ -0.31
CMC4P56277 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
CMC4P56277 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CMC4P56277 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.1□□□□□ -0.31
CMC4P56277 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.1□□□□□ -0.31
CMC4P56277 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.1□□□□□ -0.31
CMC4P56277 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CMC4P56277 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.1□□□□□ -0.31
CMC4P56277 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.1□□□□□ -0.31
CMC4P56277 SIGLEC30P-201ENST00000455569 941 ntBASIC13.1□□□□□ -0.31
CMC4P56277 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.1□□□□□ -0.31
CMC4P56277 STK19B-204ENST00000512515 211 ntBASIC13.1□□□□□ -0.31
CMC4P56277 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.1□□□□□ -0.31
CMC4P56277 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.1□□□□□ -0.31
CMC4P56277 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.1□□□□□ -0.31
CMC4P56277 AC109462.3-201ENST00000573934 613 ntBASIC13.1□□□□□ -0.31
CMC4P56277 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CMC4P56277 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.1□□□□□ -0.31
CMC4P56277 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.1□□□□□ -0.31
CMC4P56277 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.1□□□□□ -0.31
CMC4P56277 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.1□□□□□ -0.31
CMC4P56277 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.1□□□□□ -0.31
CMC4P56277 AD001527.2-201ENST00000622994 785 ntBASIC13.1□□□□□ -0.31
CMC4P56277 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.1□□□□□ -0.31
CMC4P56277 NOC2LP1-202ENST00000452600 2235 ntBASIC13.1□□□□□ -0.31
CMC4P56277 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.1□□□□□ -0.31
CMC4P56277 AC100803.2-201ENST00000562459 1963 ntBASIC13.1□□□□□ -0.31
CMC4P56277 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.1□□□□□ -0.31
CMC4P56277 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.1□□□□□ -0.31
CMC4P56277 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.1□□□□□ -0.31
CMC4P56277 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
CMC4P56277 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 AL353593.2-201ENST00000602529 1483 ntBASIC13.1□□□□□ -0.31
CMC4P56277 HLA-J-201ENST00000462773 1622 ntBASIC13.1□□□□□ -0.31
CMC4P56277 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CMC4P56277 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.09□□□□□ -0.31
CMC4P56277 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.09□□□□□ -0.31
CMC4P56277 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CMC4P56277 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CMC4P56277 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.09□□□□□ -0.31
CMC4P56277 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
CMC4P56277 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CMC4P56277 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.09□□□□□ -0.31
CMC4P56277 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CMC4P56277 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CMC4P56277 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CMC4P56277 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CMC4P56277 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CMC4P56277 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CMC4P56277 SAPCD2P3-201ENST00000455031 850 ntBASIC13.09□□□□□ -0.31
CMC4P56277 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CMC4P56277 AC106795.1-205ENST00000512851 1056 ntBASIC13.09□□□□□ -0.31
CMC4P56277 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CMC4P56277 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CMC4P56277 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.09□□□□□ -0.31
CMC4P56277 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.09□□□□□ -0.31
CMC4P56277 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.09□□□□□ -0.31
CMC4P56277 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CMC4P56277 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CMC4P56277 AP005117.1-201ENST00000584346 1413 ntBASIC13.09□□□□□ -0.31
CMC4P56277 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.09□□□□□ -0.31
CMC4P56277 AC006116.8-202ENST00000587620 1550 ntBASIC13.09□□□□□ -0.31
CMC4P56277 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.09□□□□□ -0.31
CMC4P56277 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CMC4P56277 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.09□□□□□ -0.31
CMC4P56277 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CMC4P56277 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CMC4P56277 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CMC4P56277 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms