Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CDH13P55290 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH13P55290 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDH13P55290 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH13P55290 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH13P55290 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.22■□□□□ 0.35
CDH13P55290 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH13P55290 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.22■□□□□ 0.35
CDH13P55290 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.22■□□□□ 0.35
CDH13P55290 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH13P55290 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.22■□□□□ 0.35
CDH13P55290 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH13P55290 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH13P55290 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH13P55290 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CDH13P55290 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH13P55290 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH13P55290 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH13P55290 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH13P55290 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CDH13P55290 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH13P55290 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CDH13P55290 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH13P55290 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH13P55290 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CDH13P55290 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH13P55290 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH13P55290 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH13P55290 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH13P55290 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CDH13P55290 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH13P55290 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH13P55290 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH13P55290 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH13P55290 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.21■□□□□ 0.35
CDH13P55290 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH13P55290 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH13P55290 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH13P55290 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH13P55290 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH13P55290 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH13P55290 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.21■□□□□ 0.35
CDH13P55290 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH13P55290 AC112907.2-201ENST00000448639 330 ntBASIC17.21■□□□□ 0.35
CDH13P55290 VENTXP5-201ENST00000523979 775 ntBASIC17.21■□□□□ 0.35
CDH13P55290 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH13P55290 AC005332.3-201ENST00000589904 676 ntBASIC17.21■□□□□ 0.35
CDH13P55290 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CDH13P55290 GPR32P1-201ENST00000601788 811 ntBASIC17.21■□□□□ 0.35
CDH13P55290 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CDH13P55290 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDH13P55290 AC006011.2-201ENST00000621313 1158 ntBASIC17.21■□□□□ 0.35
CDH13P55290 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CDH13P55290 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CDH13P55290 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH13P55290 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH13P55290 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH13P55290 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH13P55290 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH13P55290 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH13P55290 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CDH13P55290 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH13P55290 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.34
CDH13P55290 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH13P55290 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CDH13P55290 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 RNF152P1-201ENST00000397754 604 ntBASIC17.2■□□□□ 0.34
CDH13P55290 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CDH13P55290 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.2■□□□□ 0.34
CDH13P55290 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.2■□□□□ 0.34
CDH13P55290 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH13P55290 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
CDH13P55290 HYMAI.1-201ENST00000620949 238 ntBASIC17.2■□□□□ 0.34
CDH13P55290 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.2■□□□□ 0.34
CDH13P55290 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
CDH13P55290 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH13P55290 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH13P55290 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CDH13P55290 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms