Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH8P55286 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH8P55286 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH8P55286 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH8P55286 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
CDH8P55286 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH8P55286 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CDH8P55286 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH8P55286 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CDH8P55286 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDH8P55286 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH8P55286 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH8P55286 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH8P55286 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
CDH8P55286 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH8P55286 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH8P55286 FGFR3P6-201ENST00000457012 610 ntBASIC18.75■□□□□ 0.59
CDH8P55286 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH8P55286 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH8P55286 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.75■□□□□ 0.59
CDH8P55286 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CDH8P55286 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH8P55286 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH8P55286 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH8P55286 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH8P55286 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH8P55286 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH8P55286 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CDH8P55286 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH8P55286 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH8P55286 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH8P55286 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH8P55286 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH8P55286 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDH8P55286 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDH8P55286 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CDH8P55286 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH8P55286 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH8P55286 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH8P55286 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.74■□□□□ 0.59
CDH8P55286 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
CDH8P55286 STK25P1-201ENST00000585406 838 ntBASIC18.74■□□□□ 0.59
CDH8P55286 AC104692.2-201ENST00000603054 253 ntBASIC18.74■□□□□ 0.59
CDH8P55286 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH8P55286 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH8P55286 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH8P55286 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH8P55286 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH8P55286 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH8P55286 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH8P55286 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH8P55286 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH8P55286 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CDH8P55286 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH8P55286 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH8P55286 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH8P55286 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH8P55286 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH8P55286 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH8P55286 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH8P55286 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH8P55286 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CDH8P55286 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.73■□□□□ 0.59
CDH8P55286 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH8P55286 RBM17P3-201ENST00000417687 1192 ntBASIC18.73■□□□□ 0.59
CDH8P55286 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH8P55286 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.73■□□□□ 0.59
CDH8P55286 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.73■□□□□ 0.59
CDH8P55286 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH8P55286 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.73■□□□□ 0.59
CDH8P55286 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH8P55286 AL121912.1-201ENST00000603683 238 ntBASIC18.73■□□□□ 0.59
CDH8P55286 TP73-AS1-207ENST00000624167 988 ntBASIC18.73■□□□□ 0.59
CDH8P55286 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.73■□□□□ 0.59
CDH8P55286 AC148477.5-201ENST00000625164 1645 ntBASIC18.73■□□□□ 0.59
CDH8P55286 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH8P55286 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH8P55286 BCL2-203ENST00000589955 5011 ntBASIC18.73■□□□□ 0.59
CDH8P55286 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH8P55286 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH8P55286 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms