Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.66■□□□□ 0.26
CASP9P55211 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 AL138688.1-201ENST00000624851 1594 ntBASIC16.65■□□□□ 0.26
CASP9P55211 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.65■□□□□ 0.26
CASP9P55211 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.65■□□□□ 0.26
CASP9P55211 AK4P3-201ENST00000418260 669 ntBASIC16.65■□□□□ 0.26
CASP9P55211 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.65■□□□□ 0.26
CASP9P55211 AC112698.1-201ENST00000510299 916 ntBASIC16.65■□□□□ 0.26
CASP9P55211 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.65■□□□□ 0.26
CASP9P55211 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.65■□□□□ 0.26
CASP9P55211 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.65■□□□□ 0.26
CASP9P55211 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CASP9P55211 PRORSD1P-202ENST00000563365 2154 ntBASIC16.65■□□□□ 0.26
CASP9P55211 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.65■□□□□ 0.26
CASP9P55211 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CASP9P55211 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CASP9P55211 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.65■□□□□ 0.26
CASP9P55211 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP9P55211 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CASP9P55211 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CASP9P55211 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CASP9P55211 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CASP9P55211 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP9P55211 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP9P55211 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CASP9P55211 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.64■□□□□ 0.25
CASP9P55211 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.64■□□□□ 0.25
CASP9P55211 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP9P55211 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP9P55211 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.64■□□□□ 0.25
CASP9P55211 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP9P55211 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP9P55211 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP9P55211 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP9P55211 HBZP1-201ENST00000354915 429 ntBASIC16.64■□□□□ 0.25
CASP9P55211 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CASP9P55211 IGHGP-201ENST00000390555 1178 ntBASIC16.64■□□□□ 0.25
CASP9P55211 RNF152P1-201ENST00000397754 604 ntBASIC16.64■□□□□ 0.25
CASP9P55211 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.64■□□□□ 0.25
CASP9P55211 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CASP9P55211 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.64■□□□□ 0.25
CASP9P55211 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.64■□□□□ 0.25
CASP9P55211 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.64■□□□□ 0.25
CASP9P55211 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CASP9P55211 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.64■□□□□ 0.25
CASP9P55211 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.64■□□□□ 0.25
CASP9P55211 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.64■□□□□ 0.25
CASP9P55211 AL445228.2-201ENST00000605589 952 ntBASIC16.64■□□□□ 0.25
CASP9P55211 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.64■□□□□ 0.25
CASP9P55211 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.64■□□□□ 0.25
CASP9P55211 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CASP9P55211 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.64■□□□□ 0.25
CASP9P55211 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP9P55211 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.64■□□□□ 0.25
CASP9P55211 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CASP9P55211 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CASP9P55211 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.64■□□□□ 0.25
CASP9P55211 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.64■□□□□ 0.25
CASP9P55211 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP9P55211 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CASP9P55211 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP9P55211 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.64■□□□□ 0.25
CASP9P55211 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.64■□□□□ 0.25
CASP9P55211 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP9P55211 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP9P55211 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP9P55211 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.64■□□□□ 0.25
CASP9P55211 AC084018.2-201ENST00000613093 2607 ntBASIC16.64■□□□□ 0.25
CASP9P55211 AL353692.3-201ENST00000407031 1396 ntBASIC16.64■□□□□ 0.25
CASP9P55211 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP9P55211 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.63■□□□□ 0.25
CASP9P55211 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASP9P55211 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASP9P55211 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CASP9P55211 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASP9P55211 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CASP9P55211 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASP9P55211 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CASP9P55211 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASP9P55211 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CASP9P55211 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms