Protein–RNA interactions for Protein: P53677

AP3M2, AP-3 complex subunit mu-2, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M2P53677 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.9■□□□□ 0.62
AP3M2P53677 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.9■□□□□ 0.62
AP3M2P53677 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3M2P53677 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP3M2P53677 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3M2P53677 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.9■□□□□ 0.62
AP3M2P53677 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3M2P53677 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3M2P53677 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.9■□□□□ 0.62
AP3M2P53677 AL020989.1-201ENST00000422979 469 ntBASIC18.9■□□□□ 0.62
AP3M2P53677 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
AP3M2P53677 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.9■□□□□ 0.62
AP3M2P53677 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.9■□□□□ 0.62
AP3M2P53677 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.9■□□□□ 0.62
AP3M2P53677 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.9■□□□□ 0.62
AP3M2P53677 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.9■□□□□ 0.62
AP3M2P53677 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.9■□□□□ 0.62
AP3M2P53677 AP001269.4-201ENST00000609611 512 ntBASIC18.9■□□□□ 0.62
AP3M2P53677 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.9■□□□□ 0.62
AP3M2P53677 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
AP3M2P53677 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP3M2P53677 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP3M2P53677 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3M2P53677 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3M2P53677 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3M2P53677 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.9■□□□□ 0.62
AP3M2P53677 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
AP3M2P53677 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
AP3M2P53677 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
AP3M2P53677 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
AP3M2P53677 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.89■□□□□ 0.61
AP3M2P53677 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AP3M2P53677 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP3M2P53677 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP3M2P53677 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
AP3M2P53677 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP3M2P53677 SPDYE21P-201ENST00000413323 827 ntBASIC18.89■□□□□ 0.61
AP3M2P53677 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.89■□□□□ 0.61
AP3M2P53677 IFNL4P1-201ENST00000607083 540 ntBASIC18.89■□□□□ 0.61
AP3M2P53677 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.89■□□□□ 0.61
AP3M2P53677 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.89■□□□□ 0.61
AP3M2P53677 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AP3M2P53677 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AP3M2P53677 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP3M2P53677 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
AP3M2P53677 AC079776.2-201ENST00000641154 1609 ntBASIC18.89■□□□□ 0.61
AP3M2P53677 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP3M2P53677 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
AP3M2P53677 AC046185.3-201ENST00000623228 1824 ntBASIC18.88■□□□□ 0.61
AP3M2P53677 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP3M2P53677 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP3M2P53677 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3M2P53677 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3M2P53677 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
AP3M2P53677 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP3M2P53677 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.88■□□□□ 0.61
AP3M2P53677 SAPCD2P3-201ENST00000455031 850 ntBASIC18.88■□□□□ 0.61
AP3M2P53677 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3M2P53677 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.88■□□□□ 0.61
AP3M2P53677 AL355877.3-201ENST00000622820 899 ntBASIC18.88■□□□□ 0.61
AP3M2P53677 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.88■□□□□ 0.61
AP3M2P53677 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
AP3M2P53677 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3M2P53677 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3M2P53677 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP3M2P53677 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.88■□□□□ 0.61
AP3M2P53677 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.88■□□□□ 0.61
AP3M2P53677 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3M2P53677 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP3M2P53677 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.88■□□□□ 0.61
AP3M2P53677 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.88■□□□□ 0.61
AP3M2P53677 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP3M2P53677 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP3M2P53677 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3M2P53677 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3M2P53677 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3M2P53677 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3M2P53677 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3M2P53677 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3M2P53677 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3M2P53677 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3M2P53677 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3M2P53677 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3M2P53677 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3M2P53677 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP3M2P53677 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3M2P53677 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP3M2P53677 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3M2P53677 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3M2P53677 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3M2P53677 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP3M2P53677 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.87■□□□□ 0.61
AP3M2P53677 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
AP3M2P53677 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP3M2P53677 SIGLEC30P-201ENST00000455569 941 ntBASIC18.87■□□□□ 0.61
AP3M2P53677 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.87■□□□□ 0.61
AP3M2P53677 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.87■□□□□ 0.61
AP3M2P53677 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.87■□□□□ 0.61
AP3M2P53677 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3M2P53677 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms