Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NUP98P52948 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUP98P52948 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NUP98P52948 AC140658.5-201ENST00000438532 169 ntBASIC21.69■■□□□ 1.06
NUP98P52948 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.69■■□□□ 1.06
NUP98P52948 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.69■■□□□ 1.06
NUP98P52948 AC109322.1-201ENST00000524499 1264 ntBASIC21.69■■□□□ 1.06
NUP98P52948 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUP98P52948 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NUP98P52948 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
NUP98P52948 ABALON-201ENST00000629058 1903 ntBASIC21.69■■□□□ 1.06
NUP98P52948 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
NUP98P52948 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUP98P52948 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.69■■□□□ 1.06
NUP98P52948 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NUP98P52948 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NUP98P52948 SLC25A1P3-201ENST00000395415 828 ntBASIC21.69■■□□□ 1.06
NUP98P52948 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC21.69■■□□□ 1.06
NUP98P52948 ACTG1P14-201ENST00000446382 1122 ntBASIC21.69■■□□□ 1.06
NUP98P52948 AC074386.1-202ENST00000463561 864 ntBASIC21.69■■□□□ 1.06
NUP98P52948 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.69■■□□□ 1.06
NUP98P52948 AC093512.1-201ENST00000617969 520 ntBASIC21.69■■□□□ 1.06
NUP98P52948 AC009093.7-201ENST00000623853 1223 ntBASIC21.69■■□□□ 1.06
NUP98P52948 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.69■■□□□ 1.06
NUP98P52948 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUP98P52948 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
NUP98P52948 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.68■■□□□ 1.06
NUP98P52948 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.68■■□□□ 1.06
NUP98P52948 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NUP98P52948 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.68■■□□□ 1.06
NUP98P52948 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.68■■□□□ 1.06
NUP98P52948 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUP98P52948 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.68■■□□□ 1.06
NUP98P52948 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NUP98P52948 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.68■■□□□ 1.06
NUP98P52948 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NUP98P52948 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
NUP98P52948 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NUP98P52948 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.68■■□□□ 1.06
NUP98P52948 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
NUP98P52948 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.68■■□□□ 1.06
NUP98P52948 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.68■■□□□ 1.06
NUP98P52948 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.68■■□□□ 1.06
NUP98P52948 AL513210.1-201ENST00000629608 234 ntBASIC21.68■■□□□ 1.06
NUP98P52948 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NUP98P52948 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUP98P52948 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
NUP98P52948 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUP98P52948 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUP98P52948 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.68■■□□□ 1.06
NUP98P52948 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NUP98P52948 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NUP98P52948 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NUP98P52948 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.67■■□□□ 1.06
NUP98P52948 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NUP98P52948 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUP98P52948 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
NUP98P52948 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NUP98P52948 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
NUP98P52948 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NUP98P52948 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NUP98P52948 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NUP98P52948 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NUP98P52948 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NUP98P52948 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.67■■□□□ 1.06
NUP98P52948 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.67■■□□□ 1.06
NUP98P52948 AC093028.1-201ENST00000622998 982 ntBASIC21.67■■□□□ 1.06
NUP98P52948 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.67■■□□□ 1.06
NUP98P52948 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.67■■□□□ 1.06
NUP98P52948 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NUP98P52948 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NUP98P52948 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC21.67■■□□□ 1.06
NUP98P52948 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NUP98P52948 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NUP98P52948 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NUP98P52948 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUP98P52948 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.67■■□□□ 1.06
NUP98P52948 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUP98P52948 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUP98P52948 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC21.66■■□□□ 1.06
NUP98P52948 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NUP98P52948 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
NUP98P52948 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21.66■■□□□ 1.06
NUP98P52948 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
NUP98P52948 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.66■■□□□ 1.06
NUP98P52948 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.66■■□□□ 1.06
NUP98P52948 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
NUP98P52948 AL139327.4-201ENST00000612362 153 ntBASIC21.66■■□□□ 1.06
NUP98P52948 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUP98P52948 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUP98P52948 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
NUP98P52948 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.66■■□□□ 1.06
NUP98P52948 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.66■■□□□ 1.06
NUP98P52948 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUP98P52948 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.66■■□□□ 1.06
NUP98P52948 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUP98P52948 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUP98P52948 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUP98P52948 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
NUP98P52948 NEK7-201ENST00000367383 586 ntTSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms