Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP11P51784 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.85■□□□□ 0.77
USP11P51784 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
USP11P51784 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP11P51784 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP11P51784 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
USP11P51784 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP11P51784 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.84■□□□□ 0.77
USP11P51784 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 AC148477.5-201ENST00000625164 1645 ntBASIC19.84■□□□□ 0.77
USP11P51784 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
USP11P51784 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.84■□□□□ 0.77
USP11P51784 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.84■□□□□ 0.77
USP11P51784 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.84■□□□□ 0.77
USP11P51784 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.84■□□□□ 0.77
USP11P51784 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.84■□□□□ 0.77
USP11P51784 AC021087.4-201ENST00000563761 564 ntBASIC19.84■□□□□ 0.77
USP11P51784 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.84■□□□□ 0.77
USP11P51784 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.84■□□□□ 0.77
USP11P51784 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
USP11P51784 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.84■□□□□ 0.77
USP11P51784 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.84■□□□□ 0.77
USP11P51784 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP11P51784 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.77
USP11P51784 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP11P51784 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.83■□□□□ 0.77
USP11P51784 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP11P51784 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP11P51784 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP11P51784 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.83■□□□□ 0.77
USP11P51784 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
USP11P51784 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.83■□□□□ 0.77
USP11P51784 RNPS1P1-201ENST00000507437 918 ntBASIC19.83■□□□□ 0.77
USP11P51784 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.83■□□□□ 0.77
USP11P51784 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.83■□□□□ 0.77
USP11P51784 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.83■□□□□ 0.77
USP11P51784 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.83■□□□□ 0.77
USP11P51784 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.83■□□□□ 0.77
USP11P51784 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.83■□□□□ 0.77
USP11P51784 AC064862.7-201ENST00000604520 867 ntBASIC19.83■□□□□ 0.77
USP11P51784 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP11P51784 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.83■□□□□ 0.76
USP11P51784 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP11P51784 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.83■□□□□ 0.76
USP11P51784 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
USP11P51784 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
USP11P51784 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP11P51784 AC046185.3-201ENST00000623228 1824 ntBASIC19.83■□□□□ 0.76
USP11P51784 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP11P51784 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP11P51784 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.83■□□□□ 0.76
USP11P51784 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP11P51784 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
USP11P51784 AL138688.1-201ENST00000624851 1594 ntBASIC19.83■□□□□ 0.76
USP11P51784 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.82■□□□□ 0.76
USP11P51784 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.82■□□□□ 0.76
USP11P51784 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
USP11P51784 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.82■□□□□ 0.76
USP11P51784 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
USP11P51784 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP11P51784 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP11P51784 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP11P51784 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP11P51784 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
USP11P51784 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP11P51784 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.82■□□□□ 0.76
USP11P51784 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP11P51784 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP11P51784 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP11P51784 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.82■□□□□ 0.76
USP11P51784 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP11P51784 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.82■□□□□ 0.76
USP11P51784 BX005266.1-201ENST00000473402 457 ntBASIC19.82■□□□□ 0.76
USP11P51784 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.82■□□□□ 0.76
USP11P51784 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.82■□□□□ 0.76
USP11P51784 MTDHP4-201ENST00000600287 670 ntBASIC19.82■□□□□ 0.76
USP11P51784 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.82■□□□□ 0.76
USP11P51784 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP11P51784 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms