Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
BRCA2P51587 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCA2P51587 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
BRCA2P51587 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.48■□□□□ 0.71
BRCA2P51587 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRCA2P51587 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
BRCA2P51587 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRCA2P51587 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRCA2P51587 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BRCA2P51587 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
BRCA2P51587 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
BRCA2P51587 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BRCA2P51587 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRCA2P51587 PTCHD3P3-201ENST00000403073 906 ntBASIC19.48■□□□□ 0.71
BRCA2P51587 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.48■□□□□ 0.71
BRCA2P51587 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.48■□□□□ 0.71
BRCA2P51587 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.48■□□□□ 0.71
BRCA2P51587 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.48■□□□□ 0.71
BRCA2P51587 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.48■□□□□ 0.71
BRCA2P51587 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.48■□□□□ 0.71
BRCA2P51587 SPTSSB-204ENST00000617024 1292 ntBASIC19.48■□□□□ 0.71
BRCA2P51587 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRCA2P51587 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.48■□□□□ 0.71
BRCA2P51587 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.48■□□□□ 0.71
BRCA2P51587 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BRCA2P51587 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRCA2P51587 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BRCA2P51587 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.48■□□□□ 0.71
BRCA2P51587 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
BRCA2P51587 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BRCA2P51587 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCA2P51587 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BRCA2P51587 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.47■□□□□ 0.71
BRCA2P51587 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.47■□□□□ 0.71
BRCA2P51587 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCA2P51587 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCA2P51587 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.47■□□□□ 0.71
BRCA2P51587 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCA2P51587 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.47■□□□□ 0.71
BRCA2P51587 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCA2P51587 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.47■□□□□ 0.71
BRCA2P51587 AC140658.5-201ENST00000438532 169 ntBASIC19.47■□□□□ 0.71
BRCA2P51587 RN7SL589P-201ENST00000481268 310 ntBASIC19.47■□□□□ 0.71
BRCA2P51587 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
BRCA2P51587 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BRCA2P51587 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.47■□□□□ 0.71
BRCA2P51587 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.47■□□□□ 0.71
BRCA2P51587 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.47■□□□□ 0.71
BRCA2P51587 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCA2P51587 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.47■□□□□ 0.71
BRCA2P51587 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCA2P51587 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCA2P51587 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BRCA2P51587 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.47■□□□□ 0.71
BRCA2P51587 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCA2P51587 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCA2P51587 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.47■□□□□ 0.71
BRCA2P51587 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
BRCA2P51587 MIR6805-201ENST00000615055 62 ntBASIC19.47■□□□□ 0.71
BRCA2P51587 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.47■□□□□ 0.71
BRCA2P51587 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.47■□□□□ 0.71
BRCA2P51587 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.47■□□□□ 0.71
BRCA2P51587 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.47■□□□□ 0.71
BRCA2P51587 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCA2P51587 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BRCA2P51587 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BRCA2P51587 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
BRCA2P51587 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BRCA2P51587 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.46■□□□□ 0.71
BRCA2P51587 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.46■□□□□ 0.71
BRCA2P51587 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.46■□□□□ 0.71
BRCA2P51587 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.46■□□□□ 0.71
BRCA2P51587 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.46■□□□□ 0.71
BRCA2P51587 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BRCA2P51587 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BRCA2P51587 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.46■□□□□ 0.71
BRCA2P51587 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.46■□□□□ 0.71
BRCA2P51587 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BRCA2P51587 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BRCA2P51587 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
BRCA2P51587 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.46■□□□□ 0.71
BRCA2P51587 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BRCA2P51587 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.46■□□□□ 0.71
BRCA2P51587 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.46■□□□□ 0.71
BRCA2P51587 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BRCA2P51587 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
BRCA2P51587 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
BRCA2P51587 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BRCA2P51587 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BRCA2P51587 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BRCA2P51587 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.45■□□□□ 0.7
BRCA2P51587 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.45■□□□□ 0.7
BRCA2P51587 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRCA2P51587 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRCA2P51587 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRCA2P51587 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.45■□□□□ 0.7
BRCA2P51587 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BRCA2P51587 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
BRCA2P51587 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.45■□□□□ 0.7
BRCA2P51587 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms