Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC011840.4-201ENST00000578471 627 ntBASIC17.82■□□□□ 0.44
HADHAP40939 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
HADHAP40939 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HADHAP40939 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HADHAP40939 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.82■□□□□ 0.44
HADHAP40939 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.82■□□□□ 0.44
HADHAP40939 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HADHAP40939 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
HADHAP40939 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HADHAP40939 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HADHAP40939 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HADHAP40939 AC009949.1-201ENST00000623048 1830 ntBASIC17.82■□□□□ 0.44
HADHAP40939 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.81■□□□□ 0.44
HADHAP40939 AC016734.2-201ENST00000624325 1377 ntBASIC17.81■□□□□ 0.44
HADHAP40939 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.81■□□□□ 0.44
HADHAP40939 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 OR6D1P-203ENST00000641209 4860 ntBASIC17.81■□□□□ 0.44
HADHAP40939 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HADHAP40939 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HADHAP40939 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
HADHAP40939 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.81■□□□□ 0.44
HADHAP40939 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
HADHAP40939 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HADHAP40939 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.81■□□□□ 0.44
HADHAP40939 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
HADHAP40939 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
HADHAP40939 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.81■□□□□ 0.44
HADHAP40939 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.81■□□□□ 0.44
HADHAP40939 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HADHAP40939 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HADHAP40939 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HADHAP40939 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HADHAP40939 AC097374.2-201ENST00000618617 1306 ntBASIC17.8■□□□□ 0.44
HADHAP40939 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HADHAP40939 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.8■□□□□ 0.44
HADHAP40939 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HADHAP40939 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.8■□□□□ 0.44
HADHAP40939 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HADHAP40939 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HADHAP40939 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HADHAP40939 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HADHAP40939 AC246785.2-201ENST00000432512 513 ntBASIC17.8■□□□□ 0.44
HADHAP40939 TSSC2-201ENST00000450217 709 ntBASIC17.8■□□□□ 0.44
HADHAP40939 VENTXP7-201ENST00000475503 772 ntBASIC17.8■□□□□ 0.44
HADHAP40939 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.8■□□□□ 0.44
HADHAP40939 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HADHAP40939 AL353801.3-201ENST00000609898 542 ntBASIC17.8■□□□□ 0.44
HADHAP40939 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HADHAP40939 AL358472.4-201ENST00000633140 710 ntBASIC17.8■□□□□ 0.44
HADHAP40939 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HADHAP40939 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HADHAP40939 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HADHAP40939 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HADHAP40939 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.8■□□□□ 0.44
HADHAP40939 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.8■□□□□ 0.44
HADHAP40939 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HADHAP40939 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.8■□□□□ 0.44
HADHAP40939 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.8■□□□□ 0.44
HADHAP40939 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HADHAP40939 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HADHAP40939 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.8■□□□□ 0.44
HADHAP40939 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.8■□□□□ 0.44
HADHAP40939 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HADHAP40939 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HADHAP40939 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HADHAP40939 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HADHAP40939 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HADHAP40939 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.79■□□□□ 0.44
HADHAP40939 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.79■□□□□ 0.44
HADHAP40939 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HADHAP40939 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.79■□□□□ 0.44
HADHAP40939 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HADHAP40939 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HADHAP40939 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HADHAP40939 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HADHAP40939 AC096633.1-201ENST00000422446 749 ntBASIC17.79■□□□□ 0.44
HADHAP40939 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.79■□□□□ 0.44
HADHAP40939 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.79■□□□□ 0.44
HADHAP40939 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HADHAP40939 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HADHAP40939 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms