Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSP1P33241 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.68■□□□□ 0.42
LSP1P33241 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSP1P33241 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.68■□□□□ 0.42
LSP1P33241 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LSP1P33241 AL138781.1-201ENST00000566567 1274 ntBASIC17.68■□□□□ 0.42
LSP1P33241 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LSP1P33241 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
LSP1P33241 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LSP1P33241 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.68■□□□□ 0.42
LSP1P33241 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.68■□□□□ 0.42
LSP1P33241 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSP1P33241 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
LSP1P33241 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSP1P33241 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSP1P33241 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
LSP1P33241 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
LSP1P33241 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.68■□□□□ 0.42
LSP1P33241 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LSP1P33241 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
LSP1P33241 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LSP1P33241 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LSP1P33241 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
LSP1P33241 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSP1P33241 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSP1P33241 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
LSP1P33241 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSP1P33241 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LSP1P33241 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.67■□□□□ 0.42
LSP1P33241 AL365203.3-201ENST00000609742 2057 ntBASIC17.67■□□□□ 0.42
LSP1P33241 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LSP1P33241 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSP1P33241 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LSP1P33241 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.67■□□□□ 0.42
LSP1P33241 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
LSP1P33241 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.67■□□□□ 0.42
LSP1P33241 AC104640.1-201ENST00000562617 2109 ntBASIC17.67■□□□□ 0.42
LSP1P33241 RARRES2P10-201ENST00000564312 460 ntBASIC17.67■□□□□ 0.42
LSP1P33241 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.67■□□□□ 0.42
LSP1P33241 MYC-209ENST00000641252 345 ntBASIC17.67■□□□□ 0.42
LSP1P33241 AC133041.1-202ENST00000642053 222 ntBASIC17.67■□□□□ 0.42
LSP1P33241 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.67■□□□□ 0.42
LSP1P33241 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LSP1P33241 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LSP1P33241 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSP1P33241 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LSP1P33241 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LSP1P33241 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
LSP1P33241 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSP1P33241 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.67■□□□□ 0.42
LSP1P33241 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSP1P33241 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSP1P33241 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSP1P33241 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSP1P33241 AC092364.2-201ENST00000596710 2692 ntBASIC17.66■□□□□ 0.42
LSP1P33241 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
LSP1P33241 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSP1P33241 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSP1P33241 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.66■□□□□ 0.42
LSP1P33241 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSP1P33241 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSP1P33241 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
LSP1P33241 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSP1P33241 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.66■□□□□ 0.42
LSP1P33241 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LSP1P33241 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSP1P33241 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSP1P33241 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LSP1P33241 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSP1P33241 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.66■□□□□ 0.42
LSP1P33241 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
LSP1P33241 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.66■□□□□ 0.42
LSP1P33241 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.66■□□□□ 0.42
LSP1P33241 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.66■□□□□ 0.42
LSP1P33241 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.66■□□□□ 0.42
LSP1P33241 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSP1P33241 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.66■□□□□ 0.42
LSP1P33241 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSP1P33241 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSP1P33241 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSP1P33241 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.66■□□□□ 0.42
LSP1P33241 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSP1P33241 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSP1P33241 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSP1P33241 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSP1P33241 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSP1P33241 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
LSP1P33241 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSP1P33241 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSP1P33241 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSP1P33241 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.65■□□□□ 0.42
LSP1P33241 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSP1P33241 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSP1P33241 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.65■□□□□ 0.42
LSP1P33241 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.65■□□□□ 0.42
LSP1P33241 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LSP1P33241 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.65■□□□□ 0.42
LSP1P33241 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LSP1P33241 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSP1P33241 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms