Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
COL4A5P29400 AC107890.1-201ENST00000422478 521 ntBASIC20.9■□□□□ 0.94
COL4A5P29400 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.9■□□□□ 0.94
COL4A5P29400 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.9■□□□□ 0.94
COL4A5P29400 SLC25A39P2-201ENST00000537614 270 ntBASIC20.9■□□□□ 0.94
COL4A5P29400 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.9■□□□□ 0.94
COL4A5P29400 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A5P29400 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.9■□□□□ 0.94
COL4A5P29400 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.9■□□□□ 0.94
COL4A5P29400 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A5P29400 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.9■□□□□ 0.94
COL4A5P29400 AC008677.1-201ENST00000519230 1561 ntBASIC20.9■□□□□ 0.94
COL4A5P29400 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A5P29400 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
COL4A5P29400 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A5P29400 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A5P29400 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.9■□□□□ 0.94
COL4A5P29400 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A5P29400 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
COL4A5P29400 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL4A5P29400 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
COL4A5P29400 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
COL4A5P29400 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
COL4A5P29400 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.89■□□□□ 0.94
COL4A5P29400 RARRES2P8-201ENST00000566335 367 ntBASIC20.89■□□□□ 0.94
COL4A5P29400 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.89■□□□□ 0.94
COL4A5P29400 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.89■□□□□ 0.94
COL4A5P29400 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.89■□□□□ 0.94
COL4A5P29400 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.89■□□□□ 0.94
COL4A5P29400 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.89■□□□□ 0.94
COL4A5P29400 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL4A5P29400 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL4A5P29400 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL4A5P29400 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL4A5P29400 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL4A5P29400 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL4A5P29400 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL4A5P29400 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
COL4A5P29400 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
COL4A5P29400 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.89■□□□□ 0.93
COL4A5P29400 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL4A5P29400 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.89■□□□□ 0.93
COL4A5P29400 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.89■□□□□ 0.93
COL4A5P29400 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.89■□□□□ 0.93
COL4A5P29400 BASP1P1-201ENST00000430708 665 ntBASIC20.89■□□□□ 0.93
COL4A5P29400 FAM207CP-201ENST00000443486 507 ntBASIC20.89■□□□□ 0.93
COL4A5P29400 AC140878.1-201ENST00000565277 250 ntBASIC20.89■□□□□ 0.93
COL4A5P29400 LINC02560-201ENST00000596379 459 ntBASIC20.89■□□□□ 0.93
COL4A5P29400 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL4A5P29400 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL4A5P29400 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.88■□□□□ 0.93
COL4A5P29400 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL4A5P29400 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.88■□□□□ 0.93
COL4A5P29400 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL4A5P29400 AC063926.2-201ENST00000623766 1308 ntBASIC20.88■□□□□ 0.93
COL4A5P29400 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
COL4A5P29400 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL4A5P29400 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL4A5P29400 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
COL4A5P29400 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.88■□□□□ 0.93
COL4A5P29400 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL4A5P29400 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL4A5P29400 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL4A5P29400 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL4A5P29400 AC092580.3-201ENST00000430932 139 ntBASIC20.88■□□□□ 0.93
COL4A5P29400 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.88■□□□□ 0.93
COL4A5P29400 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.88■□□□□ 0.93
COL4A5P29400 AC116407.2-201ENST00000613639 860 ntBASIC20.88■□□□□ 0.93
COL4A5P29400 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
COL4A5P29400 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.88■□□□□ 0.93
COL4A5P29400 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL4A5P29400 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
COL4A5P29400 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL4A5P29400 GNAS-203ENST00000306120 1878 ntBASIC20.88■□□□□ 0.93
COL4A5P29400 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL4A5P29400 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL4A5P29400 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL4A5P29400 REXO1L11P-201ENST00000620964 1927 ntBASIC20.87■□□□□ 0.93
COL4A5P29400 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.87■□□□□ 0.93
COL4A5P29400 RBPMS2P1-201ENST00000437762 623 ntBASIC20.87■□□□□ 0.93
COL4A5P29400 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.87■□□□□ 0.93
COL4A5P29400 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.87■□□□□ 0.93
COL4A5P29400 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL4A5P29400 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL4A5P29400 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL4A5P29400 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL4A5P29400 AC129492.6-201ENST00000611383 1305 ntBASIC20.87■□□□□ 0.93
COL4A5P29400 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.87■□□□□ 0.93
COL4A5P29400 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL4A5P29400 AL020996.1-203ENST00000536896 2307 ntBASIC20.87■□□□□ 0.93
COL4A5P29400 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
COL4A5P29400 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.87■□□□□ 0.93
COL4A5P29400 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
COL4A5P29400 AP000997.3-201ENST00000623333 2250 ntBASIC20.87■□□□□ 0.93
COL4A5P29400 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL4A5P29400 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL4A5P29400 MRPS18AP1-201ENST00000414458 589 ntBASIC20.86■□□□□ 0.93
COL4A5P29400 CRB3P1-201ENST00000449338 276 ntBASIC20.86■□□□□ 0.93
COL4A5P29400 FAM86C2P-203ENST00000528684 1004 ntBASIC20.86■□□□□ 0.93
COL4A5P29400 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms