Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.69■□□□□ 0.26
PTPN6P29350 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.69■□□□□ 0.26
PTPN6P29350 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.69■□□□□ 0.26
PTPN6P29350 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN6P29350 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN6P29350 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN6P29350 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PTPN6P29350 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PTPN6P29350 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PTPN6P29350 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN6P29350 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN6P29350 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN6P29350 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.69■□□□□ 0.26
PTPN6P29350 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN6P29350 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN6P29350 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN6P29350 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN6P29350 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN6P29350 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN6P29350 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN6P29350 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN6P29350 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN6P29350 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PTPN6P29350 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN6P29350 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN6P29350 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN6P29350 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN6P29350 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN6P29350 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.68■□□□□ 0.26
PTPN6P29350 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN6P29350 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN6P29350 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN6P29350 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN6P29350 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN6P29350 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN6P29350 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN6P29350 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PTPN6P29350 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN6P29350 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN6P29350 BX276092.7-203ENST00000637198 1536 ntBASIC16.68■□□□□ 0.26
PTPN6P29350 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN6P29350 AC016396.2-201ENST00000562575 1417 ntBASIC16.68■□□□□ 0.26
PTPN6P29350 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN6P29350 AC116353.5-201ENST00000638148 1699 ntBASIC16.68■□□□□ 0.26
PTPN6P29350 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN6P29350 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
PTPN6P29350 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN6P29350 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN6P29350 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.68■□□□□ 0.26
PTPN6P29350 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN6P29350 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN6P29350 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN6P29350 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN6P29350 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN6P29350 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN6P29350 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN6P29350 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PTPN6P29350 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN6P29350 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PTPN6P29350 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PTPN6P29350 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN6P29350 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN6P29350 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN6P29350 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN6P29350 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN6P29350 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN6P29350 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN6P29350 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN6P29350 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN6P29350 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN6P29350 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PTPN6P29350 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.67■□□□□ 0.26
PTPN6P29350 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PTPN6P29350 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN6P29350 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.67■□□□□ 0.26
PTPN6P29350 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.67■□□□□ 0.26
PTPN6P29350 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN6P29350 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN6P29350 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN6P29350 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
PTPN6P29350 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
PTPN6P29350 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PTPN6P29350 AGGF1P2-201ENST00000426656 2106 ntBASIC16.66■□□□□ 0.26
PTPN6P29350 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN6P29350 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.66■□□□□ 0.26
PTPN6P29350 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PTPN6P29350 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PTPN6P29350 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN6P29350 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 IGHGP-201ENST00000390555 1178 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms