Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
ABCD3P28288 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
ABCD3P28288 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ABCD3P28288 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ABCD3P28288 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
ABCD3P28288 PMPCAP1-201ENST00000508114 1576 ntBASIC16.21■□□□□ 0.18
ABCD3P28288 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.21■□□□□ 0.18
ABCD3P28288 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ABCD3P28288 AC133963.1-201ENST00000504166 1679 ntBASIC16.21■□□□□ 0.18
ABCD3P28288 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
ABCD3P28288 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCD3P28288 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCD3P28288 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCD3P28288 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCD3P28288 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCD3P28288 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.2■□□□□ 0.18
ABCD3P28288 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
ABCD3P28288 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
ABCD3P28288 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.2■□□□□ 0.18
ABCD3P28288 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCD3P28288 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCD3P28288 AKR1C7P-201ENST00000305623 895 ntBASIC16.2■□□□□ 0.18
ABCD3P28288 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ABCD3P28288 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.2■□□□□ 0.18
ABCD3P28288 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ABCD3P28288 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCD3P28288 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCD3P28288 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
ABCD3P28288 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ABCD3P28288 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.2■□□□□ 0.18
ABCD3P28288 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.2■□□□□ 0.18
ABCD3P28288 AC106795.1-205ENST00000512851 1056 ntBASIC16.2■□□□□ 0.18
ABCD3P28288 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.2■□□□□ 0.18
ABCD3P28288 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
ABCD3P28288 RN7SL510P-201ENST00000581311 263 ntBASIC16.2■□□□□ 0.18
ABCD3P28288 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.2■□□□□ 0.18
ABCD3P28288 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ABCD3P28288 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.2■□□□□ 0.18
ABCD3P28288 AP000867.4-201ENST00000641616 219 ntBASIC16.2■□□□□ 0.18
ABCD3P28288 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ABCD3P28288 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCD3P28288 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.2■□□□□ 0.18
ABCD3P28288 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ABCD3P28288 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.2■□□□□ 0.18
ABCD3P28288 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCD3P28288 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ABCD3P28288 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCD3P28288 PCDHB18P-201ENST00000524813 2368 ntBASIC16.2■□□□□ 0.18
ABCD3P28288 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCD3P28288 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ABCD3P28288 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD3P28288 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.19■□□□□ 0.18
ABCD3P28288 AP005117.1-201ENST00000584346 1413 ntBASIC16.19■□□□□ 0.18
ABCD3P28288 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.19■□□□□ 0.18
ABCD3P28288 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.19■□□□□ 0.18
ABCD3P28288 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD3P28288 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.19■□□□□ 0.18
ABCD3P28288 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD3P28288 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD3P28288 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ABCD3P28288 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.19■□□□□ 0.18
ABCD3P28288 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
ABCD3P28288 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ABCD3P28288 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ABCD3P28288 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD3P28288 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD3P28288 MYCLP1-201ENST00000372451 1075 ntBASIC16.19■□□□□ 0.18
ABCD3P28288 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD3P28288 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
ABCD3P28288 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.19■□□□□ 0.18
ABCD3P28288 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.19■□□□□ 0.18
ABCD3P28288 RBM17P3-201ENST00000417687 1192 ntBASIC16.19■□□□□ 0.18
ABCD3P28288 EMBP1-201ENST00000458200 901 ntBASIC16.19■□□□□ 0.18
ABCD3P28288 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.19■□□□□ 0.18
ABCD3P28288 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.19■□□□□ 0.18
ABCD3P28288 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.19■□□□□ 0.18
ABCD3P28288 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD3P28288 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.19■□□□□ 0.18
ABCD3P28288 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD3P28288 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD3P28288 AC073592.5-201ENST00000624854 528 ntBASIC16.19■□□□□ 0.18
ABCD3P28288 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.19■□□□□ 0.18
ABCD3P28288 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ABCD3P28288 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD3P28288 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD3P28288 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.19■□□□□ 0.18
ABCD3P28288 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.19■□□□□ 0.18
ABCD3P28288 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD3P28288 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD3P28288 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.19■□□□□ 0.18
ABCD3P28288 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD3P28288 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.19■□□□□ 0.18
ABCD3P28288 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD3P28288 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.18■□□□□ 0.18
ABCD3P28288 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms