Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BCL3P20749 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BCL3P20749 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BCL3P20749 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
BCL3P20749 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BCL3P20749 PRORSD1P-202ENST00000563365 2154 ntBASIC14.97□□□□□ -0.01
BCL3P20749 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.97□□□□□ -0.01
BCL3P20749 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BCL3P20749 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BCL3P20749 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BCL3P20749 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BCL3P20749 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BCL3P20749 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BCL3P20749 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.97□□□□□ -0.01
BCL3P20749 TMPOP1-202ENST00000424642 1267 ntBASIC14.97□□□□□ -0.01
BCL3P20749 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.97□□□□□ -0.01
BCL3P20749 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BCL3P20749 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.97□□□□□ -0.01
BCL3P20749 LINC01238-205ENST00000567549 1107 ntBASIC14.97□□□□□ -0.01
BCL3P20749 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BCL3P20749 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
BCL3P20749 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BCL3P20749 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
BCL3P20749 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BCL3P20749 PCDHA12-202ENST00000613593 2588 ntBASIC14.97□□□□□ -0.01
BCL3P20749 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
BCL3P20749 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BCL3P20749 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
BCL3P20749 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.97□□□□□ -0.01
BCL3P20749 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BCL3P20749 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.97□□□□□ -0.01
BCL3P20749 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
BCL3P20749 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.97□□□□□ -0.01
BCL3P20749 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
BCL3P20749 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
BCL3P20749 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BCL3P20749 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
BCL3P20749 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
BCL3P20749 LYSMD4-203ENST00000378904 2122 ntBASIC14.96□□□□□ -0.01
BCL3P20749 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BCL3P20749 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
BCL3P20749 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
BCL3P20749 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BCL3P20749 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.96□□□□□ -0.01
BCL3P20749 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BCL3P20749 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BCL3P20749 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
BCL3P20749 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BCL3P20749 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
BCL3P20749 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
BCL3P20749 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
BCL3P20749 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BCL3P20749 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
BCL3P20749 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
BCL3P20749 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BCL3P20749 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BCL3P20749 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
BCL3P20749 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
BCL3P20749 AC096633.1-201ENST00000422446 749 ntBASIC14.96□□□□□ -0.01
BCL3P20749 AC005104.2-201ENST00000427818 678 ntBASIC14.96□□□□□ -0.01
BCL3P20749 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.96□□□□□ -0.01
BCL3P20749 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BCL3P20749 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.96□□□□□ -0.01
BCL3P20749 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.96□□□□□ -0.01
BCL3P20749 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.96□□□□□ -0.01
BCL3P20749 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
BCL3P20749 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
BCL3P20749 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BCL3P20749 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
BCL3P20749 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.96□□□□□ -0.02
BCL3P20749 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.96□□□□□ -0.02
BCL3P20749 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
BCL3P20749 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.96□□□□□ -0.02
BCL3P20749 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
BCL3P20749 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
BCL3P20749 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
BCL3P20749 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
BCL3P20749 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.95□□□□□ -0.02
BCL3P20749 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
BCL3P20749 OR6D1P-203ENST00000641209 4860 ntBASIC14.95□□□□□ -0.02
BCL3P20749 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
BCL3P20749 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BCL3P20749 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BCL3P20749 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BCL3P20749 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BCL3P20749 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BCL3P20749 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
BCL3P20749 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
BCL3P20749 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
BCL3P20749 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.95□□□□□ -0.02
BCL3P20749 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
BCL3P20749 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
BCL3P20749 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.95□□□□□ -0.02
BCL3P20749 GUSBP12-201ENST00000513727 720 ntBASIC14.95□□□□□ -0.02
BCL3P20749 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
BCL3P20749 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BCL3P20749 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BCL3P20749 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
BCL3P20749 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
BCL3P20749 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms