Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT4P19013 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.67■□□□□ 0.42
KRT4P19013 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT4P19013 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT4P19013 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT4P19013 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.67■□□□□ 0.42
KRT4P19013 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT4P19013 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT4P19013 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.67■□□□□ 0.42
KRT4P19013 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT4P19013 PRORSD1P-201ENST00000295112 541 ntBASIC17.67■□□□□ 0.42
KRT4P19013 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT4P19013 KRT18P65-201ENST00000439811 1286 ntBASIC17.67■□□□□ 0.42
KRT4P19013 AC009947.2-201ENST00000444014 672 ntBASIC17.67■□□□□ 0.42
KRT4P19013 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.67■□□□□ 0.42
KRT4P19013 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.67■□□□□ 0.42
KRT4P19013 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.67■□□□□ 0.42
KRT4P19013 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.67■□□□□ 0.42
KRT4P19013 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT4P19013 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KRT4P19013 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT4P19013 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
KRT4P19013 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT4P19013 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT4P19013 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT4P19013 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
KRT4P19013 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.67■□□□□ 0.42
KRT4P19013 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.67■□□□□ 0.42
KRT4P19013 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT4P19013 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT4P19013 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.67■□□□□ 0.42
KRT4P19013 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT4P19013 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT4P19013 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT4P19013 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
KRT4P19013 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
KRT4P19013 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT4P19013 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT4P19013 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.66■□□□□ 0.42
KRT4P19013 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT4P19013 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT4P19013 AL158047.1-201ENST00000445918 881 ntBASIC17.66■□□□□ 0.42
KRT4P19013 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.66■□□□□ 0.42
KRT4P19013 AC098590.1-201ENST00000468126 897 ntBASIC17.66■□□□□ 0.42
KRT4P19013 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT4P19013 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT4P19013 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.66■□□□□ 0.42
KRT4P19013 C2orf69P3-201ENST00000565542 1120 ntBASIC17.66■□□□□ 0.42
KRT4P19013 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT4P19013 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT4P19013 AC116353.5-201ENST00000638148 1699 ntBASIC17.66■□□□□ 0.42
KRT4P19013 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT4P19013 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT4P19013 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
KRT4P19013 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
KRT4P19013 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT4P19013 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT4P19013 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT4P19013 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT4P19013 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT4P19013 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.66■□□□□ 0.42
KRT4P19013 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.66■□□□□ 0.42
KRT4P19013 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT4P19013 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT4P19013 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT4P19013 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT4P19013 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.65■□□□□ 0.42
KRT4P19013 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT4P19013 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT4P19013 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT4P19013 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT4P19013 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.65■□□□□ 0.42
KRT4P19013 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.65■□□□□ 0.42
KRT4P19013 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.65■□□□□ 0.42
KRT4P19013 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.65■□□□□ 0.42
KRT4P19013 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.65■□□□□ 0.42
KRT4P19013 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.65■□□□□ 0.42
KRT4P19013 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT4P19013 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.65■□□□□ 0.42
KRT4P19013 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.65■□□□□ 0.42
KRT4P19013 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.65■□□□□ 0.42
KRT4P19013 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.65■□□□□ 0.42
KRT4P19013 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT4P19013 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
KRT4P19013 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT4P19013 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT4P19013 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
KRT4P19013 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT4P19013 FER1L4-210ENST00000615531 5998 ntBASIC17.65■□□□□ 0.42
KRT4P19013 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT4P19013 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT4P19013 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT4P19013 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT4P19013 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
KRT4P19013 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
KRT4P19013 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
KRT4P19013 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.64■□□□□ 0.42
KRT4P19013 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.42
KRT4P19013 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
KRT4P19013 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms