Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.47■□□□□ 0.07
ATF1P18846 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.47■□□□□ 0.07
ATF1P18846 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
ATF1P18846 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.47■□□□□ 0.07
ATF1P18846 AP000523.1-201ENST00000398242 1049 ntBASIC15.47■□□□□ 0.07
ATF1P18846 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATF1P18846 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.47■□□□□ 0.07
ATF1P18846 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.47■□□□□ 0.07
ATF1P18846 LINC00167-201ENST00000530583 1419 ntBASIC15.47■□□□□ 0.07
ATF1P18846 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.47■□□□□ 0.07
ATF1P18846 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.47■□□□□ 0.07
ATF1P18846 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.47■□□□□ 0.07
ATF1P18846 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
ATF1P18846 AL157888.1-201ENST00000631930 593 ntBASIC15.47■□□□□ 0.07
ATF1P18846 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.47■□□□□ 0.07
ATF1P18846 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATF1P18846 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATF1P18846 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
ATF1P18846 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATF1P18846 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATF1P18846 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATF1P18846 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.47■□□□□ 0.07
ATF1P18846 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATF1P18846 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATF1P18846 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATF1P18846 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
ATF1P18846 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATF1P18846 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATF1P18846 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
ATF1P18846 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.46■□□□□ 0.07
ATF1P18846 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATF1P18846 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
ATF1P18846 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
ATF1P18846 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ATF1P18846 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATF1P18846 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.46■□□□□ 0.07
ATF1P18846 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATF1P18846 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
ATF1P18846 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.46■□□□□ 0.07
ATF1P18846 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATF1P18846 AC009949.1-201ENST00000623048 1830 ntBASIC15.46■□□□□ 0.07
ATF1P18846 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATF1P18846 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ATF1P18846 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.46■□□□□ 0.07
ATF1P18846 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.46■□□□□ 0.07
ATF1P18846 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.46■□□□□ 0.07
ATF1P18846 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.46■□□□□ 0.07
ATF1P18846 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
ATF1P18846 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.46■□□□□ 0.07
ATF1P18846 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATF1P18846 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
ATF1P18846 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
ATF1P18846 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.46■□□□□ 0.07
ATF1P18846 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATF1P18846 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
ATF1P18846 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATF1P18846 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.46■□□□□ 0.07
ATF1P18846 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ATF1P18846 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATF1P18846 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATF1P18846 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ATF1P18846 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ATF1P18846 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
ATF1P18846 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
ATF1P18846 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
ATF1P18846 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ATF1P18846 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATF1P18846 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATF1P18846 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ATF1P18846 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.45■□□□□ 0.06
ATF1P18846 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.45■□□□□ 0.06
ATF1P18846 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATF1P18846 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ATF1P18846 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATF1P18846 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATF1P18846 AL162727.3-201ENST00000635661 2787 ntBASIC15.45■□□□□ 0.06
ATF1P18846 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ATF1P18846 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
ATF1P18846 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ATF1P18846 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATF1P18846 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.45■□□□□ 0.06
ATF1P18846 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATF1P18846 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATF1P18846 ECEL1P3-201ENST00000427961 737 ntBASIC15.45■□□□□ 0.06
ATF1P18846 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.45■□□□□ 0.06
ATF1P18846 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATF1P18846 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.45■□□□□ 0.06
ATF1P18846 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.45■□□□□ 0.06
ATF1P18846 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATF1P18846 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATF1P18846 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.45■□□□□ 0.06
ATF1P18846 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ATF1P18846 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.45■□□□□ 0.06
ATF1P18846 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATF1P18846 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATF1P18846 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATF1P18846 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.45■□□□□ 0.06
ATF1P18846 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATF1P18846 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATF1P18846 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms