Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCF4P15884 AP002414.4-201ENST00000589764 1148 ntBASIC18.33■□□□□ 0.52
TCF4P15884 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.33■□□□□ 0.52
TCF4P15884 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
TCF4P15884 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCF4P15884 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCF4P15884 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCF4P15884 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TCF4P15884 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCF4P15884 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCF4P15884 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TCF4P15884 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.33■□□□□ 0.52
TCF4P15884 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.33■□□□□ 0.52
TCF4P15884 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.33■□□□□ 0.52
TCF4P15884 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.32■□□□□ 0.52
TCF4P15884 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TCF4P15884 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TCF4P15884 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCF4P15884 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TCF4P15884 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.32■□□□□ 0.52
TCF4P15884 KRT18P1-202ENST00000452408 1331 ntBASIC18.32■□□□□ 0.52
TCF4P15884 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCF4P15884 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TCF4P15884 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TCF4P15884 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.32■□□□□ 0.52
TCF4P15884 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCF4P15884 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCF4P15884 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.32■□□□□ 0.52
TCF4P15884 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.32■□□□□ 0.52
TCF4P15884 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TCF4P15884 SLC25A1P3-201ENST00000395415 828 ntBASIC18.32■□□□□ 0.52
TCF4P15884 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.32■□□□□ 0.52
TCF4P15884 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TCF4P15884 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.32■□□□□ 0.52
TCF4P15884 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.32■□□□□ 0.52
TCF4P15884 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.32■□□□□ 0.52
TCF4P15884 AC109462.3-201ENST00000573934 613 ntBASIC18.32■□□□□ 0.52
TCF4P15884 MIR3180-1-201ENST00000580374 94 ntBASIC18.32■□□□□ 0.52
TCF4P15884 MIR3180-3-201ENST00000584616 94 ntBASIC18.32■□□□□ 0.52
TCF4P15884 AL049757.1-201ENST00000616842 1596 ntBASIC18.32■□□□□ 0.52
TCF4P15884 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCF4P15884 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCF4P15884 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TCF4P15884 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCF4P15884 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TCF4P15884 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TCF4P15884 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TCF4P15884 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.32■□□□□ 0.52
TCF4P15884 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.32■□□□□ 0.52
TCF4P15884 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TCF4P15884 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
TCF4P15884 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCF4P15884 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCF4P15884 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCF4P15884 AC233702.3-201ENST00000578656 1387 ntBASIC18.31■□□□□ 0.52
TCF4P15884 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCF4P15884 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCF4P15884 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.31■□□□□ 0.52
TCF4P15884 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.31■□□□□ 0.52
TCF4P15884 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.31■□□□□ 0.52
TCF4P15884 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.31■□□□□ 0.52
TCF4P15884 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCF4P15884 AC002558.1-201ENST00000488906 803 ntBASIC18.31■□□□□ 0.52
TCF4P15884 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.31■□□□□ 0.52
TCF4P15884 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.31■□□□□ 0.52
TCF4P15884 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.31■□□□□ 0.52
TCF4P15884 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TCF4P15884 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TCF4P15884 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TCF4P15884 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.31■□□□□ 0.52
TCF4P15884 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCF4P15884 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCF4P15884 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCF4P15884 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCF4P15884 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCF4P15884 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCF4P15884 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TCF4P15884 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCF4P15884 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCF4P15884 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCF4P15884 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCF4P15884 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TCF4P15884 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TCF4P15884 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCF4P15884 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCF4P15884 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCF4P15884 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCF4P15884 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCF4P15884 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TCF4P15884 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
TCF4P15884 AC246785.2-201ENST00000432512 513 ntBASIC18.3■□□□□ 0.52
TCF4P15884 TOB2P1-201ENST00000469761 992 ntBASIC18.3■□□□□ 0.52
TCF4P15884 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.3■□□□□ 0.52
TCF4P15884 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.3■□□□□ 0.52
TCF4P15884 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.3■□□□□ 0.52
TCF4P15884 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.3■□□□□ 0.52
TCF4P15884 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.3■□□□□ 0.52
TCF4P15884 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TCF4P15884 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TCF4P15884 NPAP1P7-201ENST00000613027 823 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms